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1WHD
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Asym.Unit (500 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE PDZ DOMAIN OF RGS3
Authors
:
T. Nakanishi, N. Nemoto, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Regulator Of G-Protein Signaling, Pdz Domain, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Nakanishi, N. Nemoto, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Pdz Domain Of Rgs3
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDZ (A:18-94)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
RGS3_MOUSE
18-95
1
A:18-94
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Exons
(4, 4)
Info
All Exons
Exon 1.13a (A:2-18 (gaps))
Exon 1.15c (A:19-46)
Exon 1.16b (A:46-81)
Exon 1.17 (A:81-100 (gaps))
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All Exon Boundaries
1: Boundary -/1.13a
2: Boundary 1.13a/1.15c
3: Boundary 1.15c/1.16b
4: Boundary 1.16b/1.17
5: Boundary 1.17/1.18
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.13a
ENSMUST00000084521
13a
ENSMUSE00000798656
chr4:
62280554-62280821
268
RGS3_MOUSE
1-18
18
1
A:2-18 (gaps)
18
1.15c
ENSMUST00000084521
15c
ENSMUSE00000451224
chr4:
62284879-62284960
82
RGS3_MOUSE
19-46
28
1
A:19-46
28
1.16b
ENSMUST00000084521
16b
ENSMUSE00000451215
chr4:
62286131-62286236
106
RGS3_MOUSE
46-81
36
1
A:46-81
36
1.17
ENSMUST00000084521
17
ENSMUSE00000451201
chr4:
62286776-62287127
352
RGS3_MOUSE
81-198
118
1
A:81-100 (gaps)
25
1.18
ENSMUST00000084521
18
ENSMUSE00000451197
chr4:
62287526-62287565
40
RGS3_MOUSE
199-212
14
0
-
-
1.19
ENSMUST00000084521
19
ENSMUSE00000451192
chr4:
62292158-62292354
197
RGS3_MOUSE
212-277
66
0
-
-
1.20b
ENSMUST00000084521
20b
ENSMUSE00000451183
chr4:
62295480-62295563
84
RGS3_MOUSE
278-305
28
0
-
-
1.21
ENSMUST00000084521
21
ENSMUSE00000451176
chr4:
62301751-62301862
112
RGS3_MOUSE
306-343
38
0
-
-
1.22
ENSMUST00000084521
22
ENSMUSE00000451169
chr4:
62307718-62307761
44
RGS3_MOUSE
343-357
15
0
-
-
1.23b
ENSMUST00000084521
23b
ENSMUSE00000451165
chr4:
62313748-62313870
123
RGS3_MOUSE
358-398
41
0
-
-
1.29d
ENSMUST00000084521
29d
ENSMUSE00000891286
chr4:
62350533-62351660
1128
RGS3_MOUSE
399-774
376
0
-
-
1.30a
ENSMUST00000084521
30a
ENSMUSE00000526739
chr4:
62358305-62358366
62
RGS3_MOUSE
775-795
21
0
-
-
1.32
ENSMUST00000084521
32
ENSMUSE00000526738
chr4:
62361032-62361133
102
RGS3_MOUSE
795-829
35
0
-
-
1.33
ENSMUST00000084521
33
ENSMUSE00000526734
chr4:
62361388-62361449
62
RGS3_MOUSE
829-850
22
0
-
-
1.35b
ENSMUST00000084521
35b
ENSMUSE00000526733
chr4:
62362068-62362234
167
RGS3_MOUSE
850-905
56
0
-
-
1.36c
ENSMUST00000084521
36c
ENSMUSE00000526731
chr4:
62363094-62364052
959
RGS3_MOUSE
906-966
61
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d1whda_ (A:)
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Class
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
PDZ domain
(180)
Protein domain
:
Regulator of G-protein signaling 3, RGS3
(2)
Mouse (Mus musculus) [TaxId: 10090]
(1)
1a
d1whda_
A:
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_PDZ_1whdA01 (A:18-92)
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PDZ-like
(184)
Family
:
PDZ
(172)
Mus musculus (Mouse)
(26)
1a
PDZ-1whdA01
A:18-92
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