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1WH6
Asym. Unit
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Asym.Unit (524 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SECOND CUT DOMAIN OF HUMAN HOMEOBOX PROTEIN CUX-2
Authors
:
N. Nameki, N. Tochio, S. Koshiba, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Cut Domain, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Transcription
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Nameki, N. Tochio, S. Koshiba, T. Kigawa, S. Yokoyama
Solution Structure Of The Second Cut Domain Of Human Homeobox Protein Cux-2
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: CUT (-|A:9-95|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CUT
PS51042
CUT domain profile.
CUX2_HUMAN
544-631
887-974
1038-1125
1
-
A:9-95
-
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Exons
(3, 3)
Info
All Exons
Exon 1.20 (A:1-43 (gaps))
Exon 1.21 (A:44-95)
Exon 1.22 (A:96-101 (gaps))
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All Exon Boundaries
1: Boundary 1.19/1.20
2: Boundary 1.20/1.21
3: Boundary 1.21/1.22
4: Boundary 1.22/1.23
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000261726
1
ENSE00001128994
chr12:
111471829-111472044
216
CUX2_HUMAN
1-21
21
0
-
-
1.5b
ENST00000261726
5b
ENSE00001775253
chr12:
111652004-111652114
111
CUX2_HUMAN
22-58
37
0
-
-
1.6
ENST00000261726
6
ENSE00001766284
chr12:
111655694-111655741
48
CUX2_HUMAN
59-74
16
0
-
-
1.7
ENST00000261726
7
ENSE00000998067
chr12:
111701565-111701643
79
CUX2_HUMAN
75-101
27
0
-
-
1.8
ENST00000261726
8
ENSE00000998068
chr12:
111729222-111729356
135
CUX2_HUMAN
101-146
46
0
-
-
1.9
ENST00000261726
9
ENSE00001213639
chr12:
111731250-111731373
124
CUX2_HUMAN
146-187
42
0
-
-
1.10b
ENST00000261726
10b
ENSE00001299235
chr12:
111733137-111733213
77
CUX2_HUMAN
187-213
27
0
-
-
1.11
ENST00000261726
11
ENSE00000938106
chr12:
111734277-111734343
67
CUX2_HUMAN
213-235
23
0
-
-
1.12
ENST00000261726
12
ENSE00000755136
chr12:
111736345-111736393
49
CUX2_HUMAN
235-251
17
0
-
-
1.13
ENST00000261726
13
ENSE00000755138
chr12:
111742014-111742118
105
CUX2_HUMAN
252-286
35
0
-
-
1.14
ENST00000261726
14
ENSE00000755140
chr12:
111744725-111744916
192
CUX2_HUMAN
287-350
64
0
-
-
1.15
ENST00000261726
15
ENSE00000755142
chr12:
111745003-111745061
59
CUX2_HUMAN
351-370
20
0
-
-
1.16
ENST00000261726
16
ENSE00000755143
chr12:
111746089-111746137
49
CUX2_HUMAN
370-386
17
0
-
-
1.17
ENST00000261726
17
ENSE00000755144
chr12:
111746231-111746330
100
CUX2_HUMAN
387-420
34
0
-
-
1.18
ENST00000261726
18
ENSE00000834831
chr12:
111747845-111748486
642
CUX2_HUMAN
420-634
215
0
-
-
1.19
ENST00000261726
19
ENSE00001309503
chr12:
111749904-111750005
102
CUX2_HUMAN
634-668
35
0
-
-
1.20
ENST00000261726
20
ENSE00001293611
chr12:
111757816-111758579
764
CUX2_HUMAN
668-922
255
1
A:1-43 (gaps)
112
1.21
ENST00000261726
21
ENSE00001301644
chr12:
111760225-111760384
160
CUX2_HUMAN
923-976
54
1
A:44-95
52
1.22
ENST00000261726
22
ENSE00001329663
chr12:
111772245-111772514
270
CUX2_HUMAN
976-1066
91
1
A:96-101 (gaps)
43
1.23
ENST00000261726
23
ENSE00001310756
chr12:
111776090-111776278
189
CUX2_HUMAN
1066-1129
64
0
-
-
1.24
ENST00000261726
24
ENSE00001292378
chr12:
111779584-111779857
274
CUX2_HUMAN
1129-1220
92
0
-
-
1.25b
ENST00000261726
25b
ENSE00001314718
chr12:
111785328-111788356
3029
CUX2_HUMAN
1220-1486
267
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wh6a_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
lambda repressor-like DNA-binding domains
(180)
Superfamily
:
lambda repressor-like DNA-binding domains
(180)
Family
:
CUT domain
(10)
Protein domain
:
Homeobox protein Cux-2, CUTL2
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d1wh6a_
A:
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CATH Domains
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_CUT_1wh6A01 (A:9-33)
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Clan
:
no clan defined [family: CUT]
(6)
Family
:
CUT
(6)
Homo sapiens (Human)
(5)
1a
CUT-1wh6A01
A:9-33
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Asymmetric Unit 1
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