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1WGR
Asym. Unit
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Asym.Unit (489 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE RA DOMAIN OF HUMAN GRB7 PROTEIN
Authors
:
H. Li, T. Tomizawa, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
28 May 04 (Deposition) - 28 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Ra Domain, Grb7, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Li, T. Tomizawa, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Ra Domain Of Human Grb7 Protein
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: RA (A:8-94)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RA
PS50200
Ras-associating (RA) domain profile.
GRB7_HUMAN
100-186
1
A:8-94
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Exons
(4, 4)
Info
All Exons
Exon 1.5a (A:1-10 (gaps))
Exon 1.5d (A:11-63)
Exon 1.6a (A:63-97 (gaps))
Exon 1.6d (A:98-100)
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All Exon Boundaries
1: Boundary 1.4a/1.5a
2: Boundary 1.5a/1.5d
3: Boundary 1.5d/1.6a
4: Boundary 1.6a/1.6d
5: Boundary 1.6d/1.7a
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000394211
2
ENSE00001517752
chr17:
37894576-37894645
70
GRB7_HUMAN
-
0
0
-
-
1.4a
ENST00000394211
4a
ENSE00002183795
chr17:
37898505-37898709
205
GRB7_HUMAN
1-52
52
0
-
-
1.5a
ENST00000394211
5a
ENSE00001227713
chr17:
37898819-37898969
151
GRB7_HUMAN
52-102
51
1
A:1-10 (gaps)
17
1.5d
ENST00000394211
5d
ENSE00000950638
chr17:
37899151-37899307
157
GRB7_HUMAN
103-155
53
1
A:11-63
53
1.6a
ENST00000394211
6a
ENSE00000950639
chr17:
37899433-37899554
122
GRB7_HUMAN
155-195
41
1
A:63-97 (gaps)
41
1.6d
ENST00000394211
6d
ENSE00000950640
chr17:
37899646-37899723
78
GRB7_HUMAN
196-221
26
1
A:98-100
3
1.7a
ENST00000394211
7a
ENSE00000950641
chr17:
37900323-37900460
138
GRB7_HUMAN
222-267
46
0
-
-
1.8
ENST00000394211
8
ENSE00000950642
chr17:
37900806-37900916
111
GRB7_HUMAN
268-304
37
0
-
-
1.9
ENST00000394211
9
ENSE00000950643
chr17:
37901139-37901237
99
GRB7_HUMAN
305-337
33
0
-
-
1.10
ENST00000394211
10
ENSE00000950644
chr17:
37901496-37901576
81
GRB7_HUMAN
338-364
27
0
-
-
1.11
ENST00000394211
11
ENSE00000950645
chr17:
37901675-37901791
117
GRB7_HUMAN
365-403
39
0
-
-
1.12
ENST00000394211
12
ENSE00000950646
chr17:
37901981-37902041
61
GRB7_HUMAN
404-424
21
0
-
-
1.13
ENST00000394211
13
ENSE00000950647
chr17:
37902166-37902253
88
GRB7_HUMAN
424-453
30
0
-
-
1.14
ENST00000394211
14
ENSE00001651412
chr17:
37902362-37902455
94
GRB7_HUMAN
453-484
32
0
-
-
1.15c
ENST00000394211
15c
ENSE00001850980
chr17:
37903004-37903538
535
GRB7_HUMAN
485-532
48
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1wgra_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
Ubiquitin-like
(546)
Family
:
Ras-binding domain, RBD
(83)
Protein domain
:
Growth factor receptor-bound protein 7, GRB-7
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1wgra_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_RA_1wgrA01 (A:8-94)
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Clan
:
Ubiquitin
(279)
Family
:
RA
(7)
Homo sapiens (Human)
(4)
1a
RA-1wgrA01
A:8-94
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Chain A
Asymmetric Unit 1
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