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1WFV
Asym. Unit
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Asym.Unit (525 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE FIFTH PDZ DOMAIN OF HUMAN MEMBRANE ASSOCIATED GUANYLATE KINASE INVERTED-2 (KIAA0705 PROTEIN)
Authors
:
N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
27 May 04 (Deposition) - 27 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Atrophin-1 Interacting Protein 1, Activin Receptor Interacting Protein 1, Membrane Associated Guanylate Kinase Inverted-2, Activin Type Iia Receptor, Aip1, Arip1, Acvrip1, Actriia, Magi-2, Pdz Domain, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
N. Tochio, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama
Solution Structure Of The Fifth Pdz Domain Of Human Membrane Associated Guanylate Kinase Inverted-2 (Kiaa0705 Protein)
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|-|-|-|-|A:14-96)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
MAGI2_HUMAN
17-101
426-495
605-668
778-860
920-1010
1147-1229
1
-
-
-
-
-
A:14-96
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Exons
(4, 4)
Info
All Exons
Exon 1.24 (A:1-8 (gaps))
Exon 1.25 (A:9-56)
Exon 1.26a (A:57-97)
Exon 1.28b (A:98-103)
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All Exon Boundaries
1: Boundary 1.23/1.24
2: Boundary 1.24/1.25
3: Boundary 1.25/1.26a
4: Boundary 1.26a/1.28b
5: Boundary 1.28b/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000354212
1a
ENSE00001597225
chr7:
79082890-79082336
555
MAGI2_HUMAN
1-101
101
0
-
-
1.2
ENST00000354212
2
ENSE00001303965
chr7:
78636522-78636406
117
MAGI2_HUMAN
101-140
40
0
-
-
1.3
ENST00000354212
3
ENSE00001685649
chr7:
78256555-78256436
120
MAGI2_HUMAN
140-180
41
0
-
-
1.4b
ENST00000354212
4b
ENSE00001205406
chr7:
78150962-78150747
216
MAGI2_HUMAN
180-252
73
0
-
-
1.6
ENST00000354212
6
ENSE00001330729
chr7:
78131104-78130894
211
MAGI2_HUMAN
252-322
71
0
-
-
1.8
ENST00000354212
8
ENSE00000877036
chr7:
78119157-78119078
80
MAGI2_HUMAN
322-349
28
0
-
-
1.9
ENST00000354212
9
ENSE00001145525
chr7:
77998530-77998473
58
MAGI2_HUMAN
349-368
20
0
-
-
1.10
ENST00000354212
10
ENSE00001145517
chr7:
77975360-77975239
122
MAGI2_HUMAN
368-409
42
0
-
-
1.11
ENST00000354212
11
ENSE00000698470
chr7:
77973277-77973095
183
MAGI2_HUMAN
409-470
62
0
-
-
1.12
ENST00000354212
12
ENSE00001145503
chr7:
77885898-77885260
639
MAGI2_HUMAN
470-683
214
0
-
-
1.13
ENST00000354212
13
ENSE00001021151
chr7:
77830510-77830479
32
MAGI2_HUMAN
683-693
11
0
-
-
1.15b
ENST00000354212
15b
ENSE00001307170
chr7:
77824380-77824191
190
MAGI2_HUMAN
694-757
64
0
-
-
1.16a
ENST00000354212
16a
ENSE00001385451
chr7:
77814987-77814946
42
MAGI2_HUMAN
757-771
15
0
-
-
1.18b
ENST00000354212
18b
ENSE00001021153
chr7:
77807419-77807328
92
MAGI2_HUMAN
771-801
31
0
-
-
1.19a
ENST00000354212
19a
ENSE00001021149
chr7:
77797425-77797233
193
MAGI2_HUMAN
802-866
65
0
-
-
1.20a
ENST00000354212
20a
ENSE00001021150
chr7:
77789590-77789342
249
MAGI2_HUMAN
866-949
84
0
-
-
1.22
ENST00000354212
22
ENSE00001021148
chr7:
77764523-77764338
186
MAGI2_HUMAN
949-1011
63
0
-
-
1.23
ENST00000354212
23
ENSE00001329671
chr7:
77762377-77762206
172
MAGI2_HUMAN
1011-1068
58
0
-
-
1.24
ENST00000354212
24
ENSE00001308147
chr7:
77756733-77756514
220
MAGI2_HUMAN
1068-1141
74
1
A:1-8 (gaps)
17
1.25
ENST00000354212
25
ENSE00001021152
chr7:
77755154-77755011
144
MAGI2_HUMAN
1142-1189
48
1
A:9-56
48
1.26a
ENST00000354212
26a
ENSE00001021144
chr7:
77708402-77708264
139
MAGI2_HUMAN
1190-1236
47
1
A:57-97
41
1.28b
ENST00000354212
28b
ENSE00001366055
chr7:
77649293-77646393
2901
MAGI2_HUMAN
1236-1455
220
1
A:98-103
6
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SCOP Domains
(1, 1)
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1a: SCOP_d1wfva_ (A:)
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
PDZ domain
(180)
Protein domain
:
Membrane associated guanylate kinase inverted-2 (MAGI-2, KIAA0705)
(5)
Human (Homo sapiens) [TaxId: 9606]
(5)
1a
d1wfva_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1wfvA01 (A:9-96)
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Class
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Mainly Beta
(13760)
Architecture
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Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
1wfvA01
A:9-96
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_PDZ_1wfvA01 (A:14-93)
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PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-1wfvA01
A:14-93
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Asymmetric Unit 1
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