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Asym. Unit
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Asym.Unit (682 KB)
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Models
(20 )
Title
:
THE FIRST C2 DOMAIN OF HUMAN SYNAPTOTAGMIN XIII
Authors
:
T. Nagashima, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
26 May 04 (Deposition) - 26 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
C2 Domain, Exocytosis, Neurotransmitter Release, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Endocytosis/Exocytosis Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Nagashima, F. Hayashi, S. Yokoyama
The First C2 Domain Of Human Synaptotagmin Xiii
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(3, 3)
Info
All Exons
Exon 1.6 (A:1-35)
Exon 1.7b (A:35-134)
Exon 1.8 (A:135-138)
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1: Boundary 1.5/1.6
2: Boundary 1.6/1.7b
3: Boundary 1.7b/1.8
4: Boundary 1.8/1.9b
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000020926
1a
ENSE00000711706
chr11:
45307870-45307576
295
SYT13_HUMAN
1-61
61
0
-
-
1.5
ENST00000020926
5
ENSE00000711692
chr11:
45277442-45277217
226
SYT13_HUMAN
62-137
76
0
-
-
1.6
ENST00000020926
6
ENSE00000711656
chr11:
45275955-45275821
135
SYT13_HUMAN
137-182
46
1
A:1-35
35
1.7b
ENST00000020926
7b
ENSE00000711649
chr11:
45274273-45273972
302
SYT13_HUMAN
182-282
101
1
A:35-134
100
1.8
ENST00000020926
8
ENSE00000711642
chr11:
45268063-45267934
130
SYT13_HUMAN
283-326
44
1
A:135-138
4
1.9b
ENST00000020926
9b
ENSE00001329248
chr11:
45265907-45261852
4056
SYT13_HUMAN
326-426
101
0
-
-
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SCOP Domains
(1, 1)
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1a: SCOP_d1wfma_ (A:)
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Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
C2 domain (Calcium/lipid-binding domain, CaLB)
(148)
Family
:
Synaptotagmin-like (S variant)
(38)
Protein domain
:
Synaptotagmin XIII
(1)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1wfma_
A:
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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