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1WC5
Biol. Unit 2
Info
Asym.Unit (135 KB)
Biol.Unit 1 (65 KB)
Biol.Unit 2 (66 KB)
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(1)
Title
:
SOLUBLE ADENYLYL CYCLASE CYAC FROM S. PLATENSIS IN COMPLEX WITH ALPHA,BETA-METHYLENE-ATP IN PRESENCE OF BICARBONATE
Authors
:
C. Steegborn, T. N. Litvin, L. R. Levin, J. Buck, H. Wu
Date
:
08 Nov 04 (Deposition) - 20 Dec 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Cyclase, Soluble Adenylyl Cyclase, Camp Signaling, Lyase
(Keyword Search:
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Reference
:
C. Steegborn, T. N. Litvin, L. R. Levin, J. Buck, H. Wu
Bicarbonate Activation Of Adenylyl Cyclase Via Promotion Of Catalytic Active Site Closure And Metal Recruitment
Nat. Struct. Mol. Biol. V. 12 32 2005
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCa)
1b: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCb)
1c: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCc)
1d: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCd)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
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No.
Name
Count
Type
Full Name
1
APC
2
Ligand/Ion
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
2
CA
-1
Ligand/Ion
CALCIUM ION
3
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(6, 6)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
5: BC1 (SOFTWARE)
6: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
ASP B:1017 , APC B:1500
BINDING SITE FOR RESIDUE MG B2000
2
AC4
SOFTWARE
ASP B:1017 , ILE B:1018 , ASP B:1061 , APC B:1500
BINDING SITE FOR RESIDUE CA B2100
3
AC5
SOFTWARE
ASP C:1017 , APC C:1500 , HOH C:2022
BINDING SITE FOR RESIDUE MG C2000
4
AC6
SOFTWARE
ASP C:1017 , ILE C:1018 , ASP C:1061 , APC C:1500
BINDING SITE FOR RESIDUE CA C2100
5
BC1
SOFTWARE
ASP B:1017 , ILE B:1018 , VAL B:1019 , GLY B:1020 , PHE B:1021 , THR B:1022 , VAL B:1059 , GLY B:1060 , ASP B:1061 , ARG B:1117 , MG B:2000 , HOH B:2009 , CA B:2100 , PHE C:1015 , LYS C:1057 , MET C:1064 , THR C:1139 , ALA C:1140 , ILE C:1141 , VAL C:1145 , ASN C:1146 , ARG C:1150 , HOH C:2019
BINDING SITE FOR RESIDUE APC B1500
6
BC2
SOFTWARE
LYS B:1057 , MET B:1064 , THR B:1139 , ALA B:1140 , VAL B:1145 , ASN B:1146 , ALA B:1149 , ARG B:1150 , LYS B:1184 , ASP C:1017 , ILE C:1018 , VAL C:1019 , GLY C:1020 , PHE C:1021 , THR C:1022 , VAL C:1059 , GLY C:1060 , ASP C:1061 , ARG C:1117 , MG C:2000 , HOH C:2018 , HOH C:2027 , HOH C:2028 , HOH C:2029 , CA C:2100
BINDING SITE FOR RESIDUE APC C1500
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1wc5a_ (A:)
1b: SCOP_d1wc5b_ (B:)
1c: SCOP_d1wc5c_ (C:)
1d: SCOP_d1wc5d_ (D:)
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
Nucleotide cyclase
(51)
Family
:
Adenylyl and guanylyl cyclase catalytic domain
(42)
Protein domain
:
Adenylate cyclase CyaC
(6)
Spirulina platensis [TaxId: 118562]
(6)
1a
d1wc5a_
A:
1b
d1wc5b_
B:
1c
d1wc5c_
C:
1d
d1wc5d_
D:
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CATH Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (135 KB)
Header - Asym.Unit
Biol.Unit 1 (65 KB)
Header - Biol.Unit 1
Biol.Unit 2 (66 KB)
Header - Biol.Unit 2
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