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1WAB
Asym. Unit
Info
Asym.Unit (45 KB)
Biol.Unit 1 (78 KB)
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(1)
Title
:
PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Authors
:
Y. S. Ho, L. Swenson, U. Derewenda, L. Serre, Y. Wei, Z. Dauter, M. Hattor H. Arai, T. Adachi, K. Inoue, Z. S. Derewenda
Date
:
30 Oct 96 (Deposition) - 12 Nov 97 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Oxidoreductase, Flavoprotein, Fad, Peroxisome, Platelet Factor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. S. Ho, L. Swenson, U. Derewenda, L. Serre, Y. Wei, Z. Dauter, M. Hattori, T. Adachi, J. Aoki, H. Arai, K. Inoue, Z. S. Derewenda
Brain Acetylhydrolase That Inactivates Platelet-Activating Factor Is A G-Protein-Like Trimer.
Nature V. 385 89 1997
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: CAT (UNKNOWN)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:46 , SER A:47 , GLY A:73 , GLY A:74 , ASN A:104 , HIS A:195 , HOH A:382
BINDING SITE FOR RESIDUE ACT A 300
2
CAT
UNKNOWN
SER A:47 , HIS A:195 , ASP A:192
NULL
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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End label:
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Exons
(5, 5)
Info
All Exons
Exon 1.2 (A:5-26)
Exon 1.3 (A:27-56)
Exon 1.4 (A:57-95)
Exon 1.5 (A:96-136)
Exon 1.6 (A:137-216)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
6: Boundary 1.6/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000026366
1
ENSBTAE00000214404
chr18:
50729679-50729757
79
PA1B3_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000026366
2
ENSBTAE00000214414
chr18:
50730146-50730243
98
PA1B3_BOVIN
1-26
26
1
A:5-26
22
1.3
ENSBTAT00000026366
3
ENSBTAE00000214416
chr18:
50730450-50730539
90
PA1B3_BOVIN
27-56
30
1
A:27-56
30
1.4
ENSBTAT00000026366
4
ENSBTAE00000214419
chr18:
50731215-50731331
117
PA1B3_BOVIN
57-95
39
1
A:57-95
39
1.5
ENSBTAT00000026366
5
ENSBTAE00000214421
chr18:
50731410-50731532
123
PA1B3_BOVIN
96-136
41
1
A:96-136
41
1.6
ENSBTAT00000026366
6
ENSBTAE00000214422
chr18:
50732204-50732539
336
PA1B3_BOVIN
137-232
96
1
A:137-216
80
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1waba_ (A:)
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)
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)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
SGNH hydrolase
(48)
Family
:
Acetylhydrolase
(12)
Protein domain
:
Platelet-activating factor acetylhydrolase
(8)
Cow (Bos taurus), alpha1 [TaxId: 9913]
(6)
1a
d1waba_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1wabA00 (A:5-216)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.1110, no name defined]
(34)
Cattle (Bos taurus)
(6)
1a
1wabA00
A:5-216
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Lipase_GDSL_2_1wabA01 (A:42-202)
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Clans
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)
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(
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(
)
Clan
:
SGNH_hydrolase
(17)
Family
:
Lipase_GDSL_2
(10)
Bos taurus (Bovine)
(1)
1a
Lipase_GDSL_2-1wabA01
A:42-202
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Chain A
Asymmetric Unit 1
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Asym.Unit (45 KB)
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