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1W7A
Biol. Unit 1
Info
Asym.Unit (276 KB)
Biol.Unit 1 (265 KB)
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(1)
Title
:
ATP BOUND MUTS
Authors
:
M. H. Lamers, D. Georgijevic, J. Lebbink, H. H. K. Winterwerp, B. Agiani N. De Wind, T. K. Sixma
Date
:
31 Aug 04 (Deposition) - 10 Sep 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.27
Chains
:
Asym. Unit : A,B,E,F
Biol. Unit 1: A,B,E,F (1x)
Keywords
:
Dna Binding, Abc Atpase, Alternating Atpase, Asymmetry, Atp-Binding, Dna Repair, Dna-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. H. Lamers, D. Georgijevic, J. Lebbink, H. H. K. Winterwerp, B. Agianian, N. De Wind, T. K. Sixma
Atp Increases The Affinity Between Muts Atpase Domains: Implications For Atp Hydrolysis And Conformational Changes
J. Biol. Chem. V. 279 43879 2004
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
2a: MAGNESIUM ION (MGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
2
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
2
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:621 , ATP A:1801 , HOH A:2101 , HOH A:2110 , HOH A:2132
BINDING SITE FOR RESIDUE MG A1802
2
AC2
SOFTWARE
LEU A:592 , PHE A:596 , ILE A:597 , PRO A:615 , ASN A:616 , MET A:617 , GLY A:618 , GLY A:619 , LYS A:620 , SER A:621 , THR A:622 , HIS A:760 , MG A:1802 , HOH A:2131 , HOH A:2132
BINDING SITE FOR RESIDUE ATP A1801
3
AC3
SOFTWARE
LEU B:592 , PRO B:595 , PHE B:596 , ILE B:597 , PRO B:615 , ASN B:616 , MET B:617 , GLY B:618 , GLY B:619 , LYS B:620 , SER B:621 , THR B:622 , ASP B:693 , HIS B:760 , HOH B:2124
BINDING SITE FOR RESIDUE ATP B1801
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: DNA_MISMATCH_REPAIR_2 (A:688-704,B:688-704)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DNA_MISMATCH_REPAIR_2
PS00486
DNA mismatch repair proteins mutS family signature.
MUTS_ECOLI
688-704
2
A:688-704
B:688-704
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(4, 8)
Info
All SCOP Domains
1a: SCOP_d1w7aa1 (A:270-566)
1b: SCOP_d1w7ab1 (B:270-566)
2a: SCOP_d1w7aa4 (A:2-116)
2b: SCOP_d1w7ab4 (B:14-116)
3a: SCOP_d1w7aa2 (A:567-800)
3b: SCOP_d1w7ab2 (B:567-800)
4a: SCOP_d1w7aa3 (A:117-269)
4b: SCOP_d1w7ab3 (B:117-269)
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)
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)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA repair protein MutS, domain III
(14)
Superfamily
:
DNA repair protein MutS, domain III
(14)
Family
:
DNA repair protein MutS, domain III
(12)
Protein domain
:
DNA repair protein MutS, domain III
(12)
Escherichia coli [TaxId: 562]
(8)
1a
d1w7aa1
A:270-566
1b
d1w7ab1
B:270-566
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
MutS N-terminal domain-like
(18)
Superfamily
:
DNA repair protein MutS, domain I
(13)
Family
:
DNA repair protein MutS, domain I
(11)
Protein domain
:
DNA repair protein MutS, domain I
(11)
Escherichia coli [TaxId: 562]
(8)
2a
d1w7aa4
A:2-116
2b
d1w7ab4
B:14-116
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
ABC transporter ATPase domain-like
(94)
Protein domain
:
DNA repair protein MutS, the C-terminal domain
(12)
Escherichia coli [TaxId: 562]
(8)
3a
d1w7aa2
A:567-800
3b
d1w7ab2
B:567-800
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
DNA repair protein MutS, domain II
(14)
Family
:
DNA repair protein MutS, domain II
(12)
Protein domain
:
DNA repair protein MutS, domain II
(12)
Escherichia coli [TaxId: 562]
(8)
4a
d1w7aa3
A:117-269
4b
d1w7ab3
B:117-269
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CATH Domains
(4, 8)
Info
all CATH domains
1a: CATH_1w7aA02 (A:130-265)
1b: CATH_1w7aB02 (B:130-265)
2a: CATH_1w7aA01 (A:2-124)
2b: CATH_1w7aB01 (B:14-124)
3a: CATH_1w7aA05 (A:567-800)
3b: CATH_1w7aB05 (B:567-800)
4a: CATH_1w7aA03 (A:266-384,A:538-566)
4b: CATH_1w7aB03 (B:266-384,B:538-566)
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Homologous Superfamilies
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
[code=3.30.420.110, no name defined]
(14)
Escherichia coli. Organism_taxid: 562.
(4)
1a
1w7aA02
A:130-265
1b
1w7aB02
B:130-265
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
MutS, DNA mismatch repair protein, domain I
(15)
Homologous Superfamily
:
[code=3.40.1170.10, no name defined]
(13)
Escherichia coli. Organism_taxid: 562.
(4)
2a
1w7aA01
A:2-124
2b
1w7aB01
B:14-124
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Escherichia coli. Organism_taxid: 562.
(35)
3a
1w7aA05
A:567-800
3b
1w7aB05
B:567-800
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
MutS, DNA mismatch repair protein; Chain A, domain 3
(14)
Homologous Superfamily
:
[code=1.10.1420.10, no name defined]
(14)
Escherichia coli. Organism_taxid: 562.
(4)
4a
1w7aA03
A:266-384,A:538-566
4b
1w7aB03
B:266-384,B:538-566
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
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