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1W3N
Asym. Unit
Info
Asym.Unit (213 KB)
Biol.Unit 1 (207 KB)
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(1)
Title
:
SULFOLOBUS SOLFATARICUS 2-KETO-3-DEOXYGLUCONATE (KDG) ALDOLASE COMPLEX WITH D-KDG
Authors
:
A. Theodossis, H. Walden, E. J. Westwick, H. Connaris, H. J. Lamble, D. W. Hough, M. J. Danson, G. L. Taylor
Date
:
17 Jul 04 (Deposition) - 02 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Aldolase, Archaeal Metabolism, D-Kdg
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. Theodossis, H. Walden, E. J. Westwick, H. Connaris, H. J. Lamble, D. W. Hough, M. J. Danson, G. L. Taylor
The Structural Basis For Substrate Promiscuity In 2-Keto-3-Deoxygluconate Aldolase From The Entner-Doudoroff Pathway In Sulfolobus Solfataricus
J. Biol. Chem. V. 279 43886 2004
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Hetero Components
(2, 7)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: 3-DEOXY-D-ARABINO-HEXONIC ACID (SSHa)
2b: 3-DEOXY-D-ARABINO-HEXONIC ACID (SSHb)
2c: 3-DEOXY-D-ARABINO-HEXONIC ACID (SSHc)
2d: 3-DEOXY-D-ARABINO-HEXONIC ACID (SSHd)
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No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
SSH
4
Ligand/Ion
3-DEOXY-D-ARABINO-HEXONIC ACID
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:7 , PHE A:39 , GLY A:42 , THR A:43 , THR A:44 , TYR A:130 , TYR A:132 , LYS A:155 , THR A:157 , VAL A:196 , ALA A:198 , HOH A:2181 , HOH A:2182
BINDING SITE FOR RESIDUE SSH A1295
2
AC2
SOFTWARE
PRO B:7 , PHE B:39 , GLY B:42 , THR B:43 , THR B:44 , TYR B:130 , TYR B:132 , LYS B:155 , THR B:157 , GLY B:179 , VAL B:196 , ALA B:198 , HOH B:2225 , HOH B:2226
BINDING SITE FOR RESIDUE SSH B1295
3
AC3
SOFTWARE
PRO C:7 , PHE C:39 , GLY C:42 , THR C:43 , THR C:44 , TYR C:130 , TYR C:132 , LYS C:155 , THR C:157 , HOH C:2195
BINDING SITE FOR RESIDUE SSH C1295
4
AC4
SOFTWARE
PRO D:7 , PHE D:39 , GLY D:42 , THR D:43 , THR D:44 , TYR D:130 , TYR D:132 , LYS D:155 , THR D:157 , GLY D:179 , VAL D:196 , HOH D:2142 , HOH D:2209
BINDING SITE FOR RESIDUE SSH D1295
5
AC5
SOFTWARE
GLY A:240 , SER A:241 , LEU A:242 , SER A:243 , HOH A:2159 , ARG D:106 , MET D:107 , SER D:108 , HIS D:111
BINDING SITE FOR RESIDUE GOL A1296
6
AC6
SOFTWARE
GLY B:240 , SER B:241 , LEU B:242 , SER B:243 , HOH B:2203 , ARG C:106 , MET C:107 , SER C:108 , HIS C:111 , HOH C:2080
BINDING SITE FOR RESIDUE GOL B1296
7
AC7
SOFTWARE
MET A:107 , SER A:108 , HIS A:111 , GLY D:240 , SER D:241 , LEU D:242 , SER D:243
BINDING SITE FOR RESIDUE GOL D1296
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1w3na_ (A:)
1b: SCOP_d1w3nb_ (B:)
1c: SCOP_d1w3nc_ (C:)
1d: SCOP_d1w3nd_ (D:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
2-keto-3-deoxy gluconate aldolase Eda
(4)
Sulfolobus solfataricus [TaxId: 2287]
(4)
1a
d1w3na_
A:
1b
d1w3nb_
B:
1c
d1w3nc_
C:
1d
d1w3nd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1w3nA00 (A:2-294)
1b: CATH_1w3nC00 (C:2-294)
1c: CATH_1w3nD00 (D:2-294)
1d: CATH_1w3nB00 (B:2-294)
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Organisms
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(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Sulfolobus solfataricus. Organism_taxid: 2287.
(7)
1a
1w3nA00
A:2-294
1b
1w3nC00
C:2-294
1c
1w3nD00
D:2-294
1d
1w3nB00
B:2-294
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Pfam Domains
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Asymmetric Unit 1
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