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Asym. Unit
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Asym.Unit (341 KB)
Biol.Unit 1 (227 KB)
Biol.Unit 2 (223 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE CARBOXYLTRANSFERASE DOMAIN OF ACETYL-COENZYME A CARBOXYLASE IN COMPLEX WITH CP-640186
Authors
:
H. Zhang, B. Tweel, J. Li, L. Tong
Date
:
09 Jul 04 (Deposition) - 09 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (2x)
Biol. Unit 2: B,C (1x)
Keywords
:
Transferase, Acetyl-Coa Carboxylase, Carboxyltransferase, Cp-640186, Inhibitor, Acc, Ct, Crystal Structure
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Reference
:
H. Zhang, B. Tweel, J. Li, L. Tong
Crystal Structure Of The Carboxyltransferase Domain Of Acetyl-Coenzyme A Carboxylase In Complex With Cp-640186
Structure V. 12 1683 2004
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: (3R)-1'-(9-ANTHRYLCARBONYL)-3-(MOR... (RCPa)
1b: (3R)-1'-(9-ANTHRYLCARBONYL)-3-(MOR... (RCPb)
1c: (3R)-1'-(9-ANTHRYLCARBONYL)-3-(MOR... (RCPc)
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No.
Name
Count
Type
Full Name
1
RCP
3
Ligand/Ion
(3R)-1'-(9-ANTHRYLCARBONYL)-3-(MORPHOLIN-4-YLCARBONYL)-1,4'-BIPIPERIDINE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:1757 , LYS A:1764 , MET A:1765 , ARG A:1954 , PHE A:1956 , SER A:1957 , GLY A:1958 , GLY A:1959 , LEU A:2025 , GLU A:2026 , GLN A:2028 , GLY A:2029 , HOH A:4045
BINDING SITE FOR RESIDUE RCP A3000
2
AC2
SOFTWARE
THR B:1757 , LYS B:1764 , MET B:1765 , HOH B:4127 , ARG C:1954 , PHE C:1956 , SER C:1957 , GLY C:1958 , LEU C:2025 , GLU C:2026 , GLN C:2028 , GLY C:2029
BINDING SITE FOR RESIDUE RCP B3000
3
AC3
SOFTWARE
ARG B:1954 , PHE B:1956 , GLY B:1958 , LEU B:2025 , GLU B:2026 , GLY B:2029 , ILE B:2033 , THR C:1757 , LYS C:1764 , MET C:1765
BINDING SITE FOR RESIDUE RCP C3000
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 5)
Info
All PROSITE Patterns/Profiles
1: COA_CT_NTER (A:1486-1822,B:1486-1822)
2: COA_CT_CTER (A:1826-2141,B:1826-2141,C:1826-214...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
COA_CT_NTER
PS50980
Acetyl-coenzyme A (CoA) carboxyltransferase N-terminal domain profile.
ACAC_YEAST
1486-1822
2
A:1486-1822
B:1486-1822
2
COA_CT_CTER
PS50989
Acetyl-coenzyme A (CoA) carboxyltransferase C-terminal domain profile.
ACAC_YEAST
1826-2141
3
A:1826-2141
B:1826-2141
C:1826-2141
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Exons
(1, 3)
Info
All Exons
Exon 1.1 (A:1482-2196 (gaps) | B:1482-2190 (...)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YNR016C
1
YNR016C.1
XIV:661377-654676
6702
ACAC_YEAST
1-2233
2233
3
A:1482-2196 (gaps)
B:1482-2190 (gaps)
C:1492-2190 (gaps)
715
709
699
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1w2xa1 (A:1482-1814)
1b: SCOP_d1w2xa2 (A:1815-2195)
1c: SCOP_d1w2xb1 (B:1482-1814)
1d: SCOP_d1w2xb2 (B:1815-2189)
1e: SCOP_d1w2xc1 (C:1492-1814)
1f: SCOP_d1w2xc2 (C:1815-2189)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
Biotin dependent carboxylase carboxyltransferase domain
(32)
Protein domain
:
Acetyl-coenzyme A carboxylase
(8)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(8)
1a
d1w2xa1
A:1482-1814
1b
d1w2xa2
A:1815-2195
1c
d1w2xb1
B:1482-1814
1d
d1w2xb2
B:1815-2189
1e
d1w2xc1
C:1492-1814
1f
d1w2xc2
C:1815-2189
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_1w2xC01 (C:1492-1629,C:1699-1814)
1b: CATH_1w2xA01 (A:1482-1629,A:1699-1814)
1c: CATH_1w2xB01 (B:1482-1629,B:1699-1814)
1d: CATH_1w2xA03 (A:1815-2192)
1e: CATH_1w2xB03 (B:1815-2189)
1f: CATH_1w2xC03 (C:1815-2189)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Homologous Superfamily
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Saccharomyces cerevisiae. Organism_taxid: 4932.
(1)
1a
1w2xC01
C:1492-1629,C:1699-1814
1b
1w2xA01
A:1482-1629,A:1699-1814
1c
1w2xB01
B:1482-1629,B:1699-1814
1d
1w2xA03
A:1815-2192
1e
1w2xB03
B:1815-2189
1f
1w2xC03
C:1815-2189
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Carboxyl_trans_1w2xC01 (C:1574-2130)
1b: PFAM_Carboxyl_trans_1w2xC02 (C:1574-2130)
1c: PFAM_Carboxyl_trans_1w2xC03 (C:1574-2130)
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Clan
:
ClpP_crotonase
(88)
Family
:
Carboxyl_trans
(13)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(9)
1a
Carboxyl_trans-1w2xC01
C:1574-2130
1b
Carboxyl_trans-1w2xC02
C:1574-2130
1c
Carboxyl_trans-1w2xC03
C:1574-2130
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Asym.Unit (341 KB)
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