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Asym. Unit
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Asym.Unit (89 KB)
Biol.Unit 1 (83 KB)
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(1)
Title
:
PLANT CYTOKININ DEHYDROGENASE IN COMPLEX WITH TRANS-ZEATIN
Authors
:
E. Malito, A. Mattevi
Date
:
23 Jun 04 (Deposition) - 26 Aug 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Flavoprotein, Fad, Signal, Glycoprotein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
E. Malito, A. Coda, K. Bilyeu, M. W. Fraaije, A. Mattevi
Structures Of Michaelis And Product Complexes Of Plant Cytokinin Dehydrogenase: Implications For Flavoenzyme Catalysis
J. Mol. Biol. V. 341 1237 2004
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3a: (2E)-2-METHYL-4-(9H-PURIN-6-YLAMIN... (ZEAa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
FAD
1
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
ZEA
1
Ligand/Ion
(2E)-2-METHYL-4-(9H-PURIN-6-YLAMINO)BUT-2-EN-1-OL
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:59 , ASN A:63 , ILE A:64 , HOH A:2017
BINDING SITE FOR RESIDUE NAG A1537
2
AC2
SOFTWARE
SER A:86 , ASN A:89 , HIS A:207
BINDING SITE FOR RESIDUE NAG A1538
3
AC3
SOFTWARE
PRO A:130 , PRO A:131 , ARG A:132 , ASN A:134 , ARG A:237 , NAG A:1540
BINDING SITE FOR RESIDUE NAG A1539
4
AC4
SOFTWARE
PRO A:130 , NAG A:1539
BINDING SITE FOR RESIDUE NAG A1540
5
AC5
SOFTWARE
ASN A:294
BINDING SITE FOR RESIDUE NAG A1541
6
AC6
SOFTWARE
PHE A:61 , PHE A:100 , ARG A:101 , GLY A:102 , ARG A:103 , GLY A:104 , HIS A:105 , SER A:106 , GLN A:110 , ALA A:111 , THR A:168 , ASP A:169 , TYR A:170 , LEU A:173 , THR A:174 , GLY A:176 , GLY A:177 , SER A:180 , ASN A:181 , GLY A:183 , ILE A:184 , GLY A:230 , GLY A:233 , VAL A:234 , ILE A:235 , TYR A:491 , LEU A:492 , SER A:527 , GLN A:530 , ZEA A:1536 , HOH A:2030 , HOH A:2031 , HOH A:2289
BINDING SITE FOR RESIDUE FAD A1535
7
AC7
SOFTWARE
ASP A:169 , VAL A:378 , GLU A:381 , TRP A:397 , ILE A:429 , SER A:456 , LEU A:458 , LEU A:492 , FAD A:1535 , HOH A:2076 , HOH A:2290
BINDING SITE FOR RESIDUE ZEA A1536
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: FAD_PCMH (A:65-245)
2: OX2_COVAL_FAD (A:69-105)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FAD_PCMH
PS51387
PCMH-type FAD-binding domain profile.
CKX1_MAIZE
65-245
1
A:65-245
2
OX2_COVAL_FAD
PS00862
Oxygen oxidoreductases covalent FAD-binding site.
CKX1_MAIZE
69-105
1
A:69-105
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1w1ra2 (A:40-245)
2a: SCOP_d1w1ra1 (A:246-534)
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Classes
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(
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Folds
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(
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FAD-binding/transporter-associated domain-like
(99)
Superfamily
:
FAD-binding/transporter-associated domain-like
(99)
Family
:
FAD-linked oxidases, N-terminal domain
(29)
Protein domain
:
Cytokinin dehydrogenase 1
(4)
Maize (Zea mays) [TaxId: 4577]
(4)
1a
d1w1ra2
A:40-245
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
FAD-linked oxidases, C-terminal domain
(42)
Family
:
Cytokinin dehydrogenase 1
(14)
Protein domain
:
Cytokinin dehydrogenase 1
(4)
Maize (Zea mays) [TaxId: 4577]
(4)
2a
d1w1ra1
A:246-534
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Cytokin_bind_1w1rA01 (A:246-533)
2a: PFAM_FAD_binding_4_1w1rA02 (A:69-214)
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Clans
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(
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Families
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)
(
)
Organisms
(
)
(
)
Clan
:
FAD-oxidase_C
(26)
Family
:
Cytokin-bind
(8)
Zea mays (Maize)
(7)
1a
Cytokin-bind-1w1rA01
A:246-533
Clan
:
FAD_PCMH
(53)
Family
:
FAD_binding_4
(31)
Zea mays (Maize)
(7)
2a
FAD_binding_4-1w1rA02
A:69-214
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Chain A
Asymmetric Unit 1
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