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1W0U
Asym. Unit
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Asym.Unit (39 KB)
Biol.Unit 1 (35 KB)
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(1)
Title
:
HTRF2 DNA-BINDING DOMAIN IN COMPLEX WITH TELOMERIC DNA.
Authors
:
R. I. Court, L. M. Chapman, L. Fairall, D. Rhodes
Date
:
11 Jun 04 (Deposition) - 22 Dec 04 (Release) - 09 Jun 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Telomere, Dna-Binding Protein, Homeodomain, Mitosis, Cell Cycle, Nuclear Protein, Chromosomal Protein, Phosphorylation, Adp-Ribosylation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
R. I. Court, L. M. Chapman, L. Fairall, D. Rhodes
How The Human Telomeric Proteins Trf1 And Trf2 Recognize Telomeric Dna: A View From High-Resolution Crystal Structures
Embo Rep. V. 6 39 2005
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(1, 2)
Info
All Exons
Exon 1.10 (A:446-458 | B:446-458)
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All Exon Boundaries
1: Boundary 1.9/1.10
2: Boundary 1.10/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000254942
1
ENSE00001141462
chr16:
69419859-69419496
364
TERF2_HUMAN
1-85
85
0
-
-
1.2
ENST00000254942
2
ENSE00000904627
chr16:
69419389-69419294
96
TERF2_HUMAN
85-117
33
0
-
-
1.3
ENST00000254942
3
ENSE00000904625
chr16:
69418613-69418483
131
TERF2_HUMAN
117-160
44
0
-
-
1.4
ENST00000254942
4
ENSE00000904623
chr16:
69406258-69406172
87
TERF2_HUMAN
161-189
29
0
-
-
1.5
ENST00000254942
5
ENSE00000904620
chr16:
69404532-69404386
147
TERF2_HUMAN
190-238
49
0
-
-
1.6
ENST00000254942
6
ENSE00000904618
chr16:
69402385-69402279
107
TERF2_HUMAN
239-274
36
0
-
-
1.7
ENST00000254942
7
ENSE00000904616
chr16:
69401102-69400710
393
TERF2_HUMAN
274-405
132
0
-
-
1.8
ENST00000254942
8
ENSE00000904614
chr16:
69395392-69395307
86
TERF2_HUMAN
405-434
30
0
-
-
1.9
ENST00000254942
9
ENSE00000904612
chr16:
69391464-69391421
44
TERF2_HUMAN
434-448
15
0
-
-
1.10
ENST00000254942
10
ENSE00001141451
chr16:
69390959-69389464
1496
TERF2_HUMAN
449-500
52
2
A:446-458
B:446-458
13
13
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1w0ua_ (A:)
1b: SCOP_d1w0ub_ (B:)
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Protein Domains
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)
(
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Organisms
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)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Homeodomain-like
(373)
Family
:
DNA-binding domain of telomeric protein
(9)
Protein domain
:
Telomeric repeat binding factor 2, TRF2
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d1w0ua_
A:
1b
d1w0ub_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1w0uA00 (A:446-500)
1b: CATH_1w0uB00 (B:446-500)
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)
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
Homeodomain-like
(288)
Human (Homo sapiens)
(23)
1a
1w0uA00
A:446-500
1b
1w0uB00
B:446-500
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Myb_DNA_binding_1w0uB01 (B:446-453)
1b: PFAM_Myb_DNA_binding_1w0uB02 (B:446-453)
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Clan
:
HTH
(544)
Family
:
Myb_DNA-binding
(17)
Homo sapiens (Human)
(17)
1a
Myb_DNA-binding-1w0uB01
B:446-453
1b
Myb_DNA-binding-1w0uB02
B:446-453
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Asymmetric Unit 1
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Asym.Unit (39 KB)
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