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1VZJ
Asym. Unit
Info
Asym.Unit (58 KB)
Biol.Unit 1 (27 KB)
Biol.Unit 2 (29 KB)
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(1)
Title
:
STRUCTURE OF THE TETRAMERIZATION DOMAIN OF ACETYLCHOLINESTERASE: FOUR-FOLD INTERACTION OF A WWW MOTIF WITH A LEFT-HANDED POLYPROLINE HELIX
Authors
:
H. Dvir, M. Harel, S. Bon, W. -Q. Liu, M. Vidal, C. Garbay, J. L. Sussman, J. Massoulie, I. Silman
Date
:
20 May 04 (Deposition) - 10 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,I (1x)
Biol. Unit 2: E,F,G,H,J (1x)
Keywords
:
Hydrolase, Acetylcholinesterase, Signal, Synapse, Neurotransmitter Degradation, Alternative Splicing, Disease Mutation.
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Dvir, M. Harel, S. Bon, W. -Q. Liu, M. Vidal, C. Garbay, J. L. Sussman, J. Massoulie, I. Silman
The Synaptic Acetylcholinesterase Tetramer Assembles Around A Polyproline-Ii Helix
Embo J. V. 23 4394 2004
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Hetero Components
(1, 8)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_010133 (P7Q, chain I/J, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_010133
P
59
Q
COLQ_HUMAN
Disease (CMS5)
---
I/J
P
7
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(3, 16)
Info
All Exons
Exon 1.7a (- | B:1-1 | C:1-1 | D:1-1 | - | F:...)
Exon 1.9h (A:3-28 | B:1-31 | C:1-32 | D:1-32 ...)
Exon 2.3 (I:1-15 | J:1-15)
View:
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Label:
All Exon Boundaries
1: Boundary 1.6c/1.7a
2: Boundary 1.7a/1.9h
3: Boundary 1.9h/-
4: Boundary 2.1a/2.3
5: Boundary 2.3/2.4a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.4b
ENST00000241069
4b
ENSE00001873556
chr7:
100493509-100493423
87
ACES_HUMAN
-
0
0
-
-
1.5e
ENST00000241069
5e
ENSE00001741634
chr7:
100491873-100490786
1088
ACES_HUMAN
1-356
356
0
-
-
1.6c
ENST00000241069
6c
ENSE00001609117
chr7:
100490439-100489955
485
ACES_HUMAN
357-518
162
0
-
-
1.7a
ENST00000241069
7a
ENSE00001762084
chr7:
100488959-100488790
170
ACES_HUMAN
518-575
58
6
-
B:1-1
C:1-1
D:1-1
-
F:1-1
G:1-1
H:1-1
-
1
1
1
-
1
1
1
1.9h
ENST00000241069
9h
ENSE00001639836
chr7:
100487956-100487615
342
ACES_HUMAN
575-614
40
8
A:3-28
B:1-31
C:1-32
D:1-32
E:2-28
F:1-34
G:1-34
H:1-32
26
31
32
32
27
34
34
32
2.1a
ENST00000383788
1a
ENSE00001498677
chr3:
15563258-15563027
232
COLQ_HUMAN
1-36
36
0
-
-
2.3
ENST00000383788
3
ENSE00001498676
chr3:
15531144-15531032
113
COLQ_HUMAN
36-73
38
2
I:1-15
J:1-15
15
15
2.4a
ENST00000383788
4a
ENSE00001498675
chr3:
15529814-15529713
102
COLQ_HUMAN
74-107
34
0
-
-
2.5a
ENST00000383788
5a
ENSE00001498674
chr3:
15520889-15520845
45
COLQ_HUMAN
108-122
15
0
-
-
2.6a
ENST00000383788
6a
ENSE00001498673
chr3:
15520510-15520484
27
COLQ_HUMAN
123-131
9
0
-
-
2.8b
ENST00000383788
8b
ENSE00001498672
chr3:
15518704-15518633
72
COLQ_HUMAN
132-155
24
0
-
-
2.9a
ENST00000383788
9a
ENSE00001498671
chr3:
15516994-15516932
63
COLQ_HUMAN
156-176
21
0
-
-
2.10
ENST00000383788
10
ENSE00001498670
chr3:
15516458-15516432
27
COLQ_HUMAN
177-185
9
0
-
-
2.11b
ENST00000383788
11b
ENSE00001498669
chr3:
15515779-15515735
45
COLQ_HUMAN
186-200
15
0
-
-
2.12
ENST00000383788
12
ENSE00002084171
chr3:
15515542-15515507
36
COLQ_HUMAN
201-212
12
0
-
-
2.13
ENST00000383788
13
ENSE00001644936
chr3:
15512123-15512043
81
COLQ_HUMAN
213-239
27
0
-
-
2.15b
ENST00000383788
15b
ENSE00001667948
chr3:
15507944-15507848
97
COLQ_HUMAN
240-272
33
0
-
-
2.16
ENST00000383788
16
ENSE00001655153
chr3:
15499832-15499693
140
COLQ_HUMAN
272-318
47
0
-
-
2.17
ENST00000383788
17
ENSE00001617617
chr3:
15498086-15497967
120
COLQ_HUMAN
319-358
40
0
-
-
2.18a
ENST00000383788
18a
ENSE00001771933
chr3:
15497526-15497406
121
COLQ_HUMAN
359-399
41
0
-
-
2.19a
ENST00000383788
19a
ENSE00001744790
chr3:
15495438-15495336
103
COLQ_HUMAN
399-433
35
0
-
-
2.20d
ENST00000383788
20d
ENSE00001831281
chr3:
15493220-15491654
1567
COLQ_HUMAN
433-455
23
0
-
-
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_AChE_tetra_1vzjH01 (H:4-32)
1b: PFAM_AChE_tetra_1vzjH02 (H:4-32)
1c: PFAM_AChE_tetra_1vzjH03 (H:4-32)
1d: PFAM_AChE_tetra_1vzjH04 (H:4-32)
1e: PFAM_AChE_tetra_1vzjH05 (H:4-32)
1f: PFAM_AChE_tetra_1vzjH06 (H:4-32)
1g: PFAM_AChE_tetra_1vzjH07 (H:4-32)
1h: PFAM_AChE_tetra_1vzjH08 (H:4-32)
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Clans
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(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: AChE_tetra]
(1)
Family
:
AChE_tetra
(1)
Homo sapiens (Human)
(1)
1a
AChE_tetra-1vzjH01
H:4-32
1b
AChE_tetra-1vzjH02
H:4-32
1c
AChE_tetra-1vzjH03
H:4-32
1d
AChE_tetra-1vzjH04
H:4-32
1e
AChE_tetra-1vzjH05
H:4-32
1f
AChE_tetra-1vzjH06
H:4-32
1g
AChE_tetra-1vzjH07
H:4-32
1h
AChE_tetra-1vzjH08
H:4-32
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