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1VYU
Biol. Unit 2
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Asym.Unit (102 KB)
Biol.Unit 1 (51 KB)
Biol.Unit 2 (51 KB)
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(1)
Title
:
BETA3 SUBUNIT OF VOLTAGE-GATED CA2+-CHANNEL
Authors
:
Y. -H. Chen, M. -H. Li, Y. Zhang, L. -L. He, Y. Yamada, A. Fitzmaurice, S. Yang, H. Zhang, T. Liang, J. Yang
Date
:
07 May 04 (Deposition) - 15 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Calcium Channel Beta Subunit, Aid Doamin, Ion Transport, Ionic Channel, Voltage-Gated Channel, Sh3 Domain
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Y. -H. Chen, M. -H. Li, Y. Zhang, L. -L. He, Y. Yamada, A. Fitzmaurice, Y. Shen, H. Zhang, L. Tong, J. Yang
Structural Basis Of The Alpha(1)-Beta Subunit Interaction Of Voltage-Gated Ca(2+) Channels
Nature V. 429 675 2004
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
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No.
Name
Count
Type
Full Name
1
MSE
6
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d1vyua1 (A:39-174)
1b: SCOP_d1vyub1 (B:38-174)
2a: SCOP_d1vyua2 (A:175-361)
2b: SCOP_d1vyub2 (B:175-361)
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Protein Domains
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Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
SH3-domain
(369)
Family
:
SH3-domain
(255)
Protein domain
:
SH3-like domain of the L-type calcium channel
(9)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(5)
1a
d1vyua1
A:39-174
1b
d1vyub1
B:38-174
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Nucleotide and nucleoside kinases
(231)
Protein domain
:
Guanylate kinase-like domain of the L-type calcium channel
(9)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(5)
2a
d1vyua2
A:175-361
2b
d1vyub2
B:175-361
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_1vyuB02 (B:178-194,B:197-225,B:245-362)
1b: CATH_1vyuA02 (A:179-363)
2a: CATH_1vyuA01 (A:39-175)
2b: CATH_1vyuB01 (B:31-138,B:139-176)
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)
Organisms
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)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Rat (Rattus norvegicus)
(9)
1a
1vyuB02
B:178-194,B:197-225,B:245-362
1b
1vyuA02
A:179-363
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
SH3 Domains
(267)
Rat (Rattus norvegicus)
(3)
2a
1vyuA01
A:39-175
2b
1vyuB01
B:31-138,B:139-176
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Guanylate_kin_1vyuB01 (B:176-356)
1b: PFAM_Guanylate_kin_1vyuB02 (B:176-356)
2a: PFAM_VGCC_beta4Aa_N_1vyuB03 (B:31-58)
2b: PFAM_VGCC_beta4Aa_N_1vyuB04 (B:31-58)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Guanylate_kin
(23)
Rattus norvegicus (Rat)
(7)
1a
Guanylate_kin-1vyuB01
B:176-356
1b
Guanylate_kin-1vyuB02
B:176-356
Clan
:
no clan defined [family: VGCC_beta4Aa_N]
(6)
Family
:
VGCC_beta4Aa_N
(6)
Rattus norvegicus (Rat)
(4)
2a
VGCC_beta4Aa_N-1vyuB03
B:31-58
2b
VGCC_beta4Aa_N-1vyuB04
B:31-58
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Chain B
Asymmetric Unit 1
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Asym.Unit (102 KB)
Header - Asym.Unit
Biol.Unit 1 (51 KB)
Header - Biol.Unit 1
Biol.Unit 2 (51 KB)
Header - Biol.Unit 2
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