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1VD2
Asym. Unit
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Asym.Unit (473 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE PB1 DOMAIN OF PKCIOTA
Authors
:
Y. Hirano, S. Yoshinaga, M. Yokochi, K. Ogura, Y. Noda, H. Sumimoto, F. Inagaki
Date
:
18 Mar 04 (Deposition) - 14 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Kinase, Pb1 Domain, Opca Motif, Apkc, Zip/P62, Mek5, Molecular Recognition, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Hirano, S. Yoshinaga, K. Ogura, M. Yokochi, Y. Noda, H. Sumimoto, F. Inagaki
Solution Structure Of Atypical Protein Kinase C Pb1 Domain And Its Mode Of Interaction With Zip/P62 And Mek5
J. Biol. Chem. V. 279 31883 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PB1 (A:16-99)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PB1
PS51745
PB1 domain profile.
KPCI_HUMAN
25-108
1
A:16-99
[
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Exons
(4, 4)
Info
All Exons
Exon 1.1 (A:11-25)
Exon 1.2 (A:25-66)
Exon 1.3 (A:66-96)
Exon 1.4 (A:96-99)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/1.2
3: Boundary 1.2/1.3
4: Boundary 1.3/1.4
5: Boundary 1.4/1.5
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000295797
1
ENSE00001214914
chr3:
169940153-169940558
406
KPCI_HUMAN
1-34
34
1
A:11-25
15
1.2
ENST00000295797
2
ENSE00001214893
chr3:
169953018-169953139
122
KPCI_HUMAN
34-75
42
1
A:25-66
42
1.3
ENST00000295797
3
ENSE00001214886
chr3:
169977757-169977846
90
KPCI_HUMAN
75-105
31
1
A:66-96
31
1.4
ENST00000295797
4
ENSE00001148476
chr3:
169981167-169981217
51
KPCI_HUMAN
105-122
18
1
A:96-99
4
1.5
ENST00000295797
5
ENSE00001148468
chr3:
169985703-169985788
86
KPCI_HUMAN
122-150
29
0
-
-
1.6
ENST00000295797
6
ENSE00001148464
chr3:
169988209-169988349
141
KPCI_HUMAN
151-197
47
0
-
-
1.7
ENST00000295797
7
ENSE00001075938
chr3:
169991074-169991128
55
KPCI_HUMAN
198-216
19
0
-
-
1.8
ENST00000295797
8
ENSE00001075940
chr3:
169993017-169993075
59
KPCI_HUMAN
216-235
20
0
-
-
1.9b
ENST00000295797
9b
ENSE00001148448
chr3:
169998015-169998191
177
KPCI_HUMAN
236-294
59
0
-
-
1.10b
ENST00000295797
10b
ENSE00001148444
chr3:
169998954-169999051
98
KPCI_HUMAN
295-327
33
0
-
-
1.11b
ENST00000295797
11b
ENSE00001148433
chr3:
169999670-169999756
87
KPCI_HUMAN
327-356
30
0
-
-
1.12
ENST00000295797
12
ENSE00001148423
chr3:
170002249-170002384
136
KPCI_HUMAN
356-401
46
0
-
-
1.13b
ENST00000295797
13b
ENSE00001075955
chr3:
170009642-170009729
88
KPCI_HUMAN
402-431
30
0
-
-
1.14c
ENST00000295797
14c
ENSE00001075932
chr3:
170011171-170011296
126
KPCI_HUMAN
431-473
43
0
-
-
1.15
ENST00000295797
15
ENSE00001075936
chr3:
170013699-170013778
80
KPCI_HUMAN
473-499
27
0
-
-
1.16b
ENST00000295797
16b
ENSE00001148389
chr3:
170015092-170015181
90
KPCI_HUMAN
500-529
30
0
-
-
1.17
ENST00000295797
17
ENSE00001148380
chr3:
170016783-170016898
116
KPCI_HUMAN
530-568
39
0
-
-
1.18c
ENST00000295797
18c
ENSE00001868699
chr3:
170020828-170023769
2942
KPCI_HUMAN
568-596
29
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1vd2a_ (A:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
beta-Grasp (ubiquitin-like)
(1032)
Superfamily
:
CAD & PB1 domains
(31)
Family
:
PB1 domain
(24)
Protein domain
:
Protein kinase C, iota type
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1vd2a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1vd2A00 (A:11-99)
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
[code=3.10.20.240, no name defined]
(17)
Human (Homo sapiens)
(9)
1a
1vd2A00
A:11-99
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PB1_1vd2A01 (A:16-98)
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Clans
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Clan
:
Ubiquitin
(279)
Family
:
PB1
(15)
Homo sapiens (Human)
(8)
1a
PB1-1vd2A01
A:16-98
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Asym.Unit (473 KB)
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