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1VBF
Asym. Unit
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Asym.Unit (162 KB)
Biol.Unit 1 (231 KB)
Biol.Unit 2 (226 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PROTEIN L-ISOASPARTATE O-METHYLTRANSFERASE HOMOLOGUE FROM SULFOLOBUS TOKODAII
Authors
:
Y. Tanaka, K. Tsumoto, Y. Yasutake, M. Umetsu, M. Yao, I. Tanaka, H. Fuka I. Kumagai
Date
:
25 Feb 04 (Deposition) - 10 Aug 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (3x)
Biol. Unit 2: C,D (3x)
Keywords
:
Trimeric Coiled Coil Assembly, Inter-Subunit Disulfide Bridge, Protein Repair Enzyme, Transferase
(Keyword Search:
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Reference
:
Y. Tanaka, K. Tsumoto, Y. Yasutake, M. Umetsu, M. Yao, H. Fukada, I. Tanaka, I. Kumagai
How Oligomerization Contributes To The Thermostability Of A Archaeon Protein: Protein L-Isoaspartyl-O-Methyltransferase From Sulfolobus Tokodaii
J. Biol. Chem. V. 279 32957 2004
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Hetero Components
(1, 16)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
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No.
Name
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Type
Full Name
1
MSE
16
Mod. Amino Acid
SELENOMETHIONINE
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Sites
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Exons
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1vbfa_ (A:)
1b: SCOP_d1vbfb_ (B:)
1c: SCOP_d1vbfc_ (C:)
1d: SCOP_d1vbfd_ (D:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
Protein-L-isoaspartyl O-methyltransferase
(9)
Protein domain
:
Protein-L-isoaspartyl O-methyltransferase
(9)
Sulfolobus tokodaii [TaxId: 111955]
(1)
1a
d1vbfa_
A:
1b
d1vbfb_
B:
1c
d1vbfc_
C:
1d
d1vbfd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1vbfA00 (A:1-224)
1b: CATH_1vbfC00 (C:1-224)
1c: CATH_1vbfD00 (D:1-224)
1d: CATH_1vbfB00 (B:1-226)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Vaccinia Virus protein VP39
(378)
Sulfolobus tokodaii. Organism_taxid: 111955.
(1)
1a
1vbfA00
A:1-224
1b
1vbfC00
C:1-224
1c
1vbfD00
D:1-224
1d
1vbfB00
B:1-226
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_PCMT_1vbfD01 (D:2-199)
1b: PFAM_PCMT_1vbfD02 (D:2-199)
1c: PFAM_PCMT_1vbfD03 (D:2-199)
1d: PFAM_PCMT_1vbfD04 (D:2-199)
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Clan
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NADP_Rossmann
(1239)
Family
:
PCMT
(7)
Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
(1)
1a
PCMT-1vbfD01
D:2-199
1b
PCMT-1vbfD02
D:2-199
1c
PCMT-1vbfD03
D:2-199
1d
PCMT-1vbfD04
D:2-199
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Asym.Unit (162 KB)
Header - Asym.Unit
Biol.Unit 1 (231 KB)
Header - Biol.Unit 1
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