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Asym. Unit
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Asym.Unit (208 KB)
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Models
(10 )
Title
:
SOLUTION STRUCTURES OF THE P47 SEP DOMAIN
Authors
:
X. Yuan, P. Simpson, C. Mckeown, H. Kondo, K. Uchiyama, R. Wallis, I. Dreveny, C. Keetch, X. Zhang, C. Robinson, P. Freemont, S. Matthews
Date
:
20 Feb 04 (Deposition) - 06 Apr 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Keywords
:
Beta-Beta-Beta-Alpha-Alpha-Beta, Novel Fold, Lipid Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Yuan, P. Simpson, C. Mckeown, H. Kondo, K. Uchiyama, R. Wallis, I. Dreveny, C. Keetch, X. Zhang, C. Robinson, P. Freemont, S. Matthews
Structure, Dynamics And Interactions Of P47, A Major Adaptor Of The Aaa Atpase, P97.
Embo J. V. 23 1463 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available in "Model" view)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: SEP (A:9-74)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SEP
PS51399
SEP domain profile.
NSF1C_RAT
179-244
1
A:9-74
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Exons
(3, 3)
Info
All Exons
Exon 1.6 (A:1-9)
Exon 1.7 (A:10-46)
Exon 1.8 (A:46-76)
View:
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000011654
1
ENSRNOE00000080778
chr3:
141799286-141799498
213
NSF1C_RAT
1-35
35
0
-
-
1.2
ENSRNOT00000011654
2
ENSRNOE00000080974
chr3:
141801645-141801742
98
NSF1C_RAT
36-68
33
0
-
-
1.3
ENSRNOT00000011654
3
ENSRNOE00000081202
chr3:
141806924-141806998
75
NSF1C_RAT
68-93
26
0
-
-
1.5
ENSRNOT00000011654
5
ENSRNOE00000081435
chr3:
141809288-141809453
166
NSF1C_RAT
93-148
56
0
-
-
1.6
ENSRNOT00000011654
6
ENSRNOE00000081642
chr3:
141810321-141810413
93
NSF1C_RAT
149-179
31
1
A:1-9
9
1.7
ENSRNOT00000011654
7
ENSRNOE00000081878
chr3:
141811633-141811742
110
NSF1C_RAT
180-216
37
1
A:10-46
37
1.8
ENSRNOT00000011654
8
ENSRNOE00000082111
chr3:
141812671-141812808
138
NSF1C_RAT
216-262
47
1
A:46-76
31
1.9
ENSRNOT00000011654
9
ENSRNOE00000082354
chr3:
141821967-141822131
165
NSF1C_RAT
262-317
56
0
-
-
1.10
ENSRNOT00000011654
10
ENSRNOE00000349261
chr3:
141823371-141823731
361
NSF1C_RAT
317-370
54
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1vaza_ (A:)
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(
)
(
)
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(
)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
NSFL1 (p97 ATPase) cofactor p47, SEP domain
(2)
Superfamily
:
NSFL1 (p97 ATPase) cofactor p47, SEP domain
(2)
Family
:
NSFL1 (p97 ATPase) cofactor p47, SEP domain
(2)
Protein domain
:
NSFL1 (p97 ATPase) cofactor p47, SEP domain
(2)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
1a
d1vaza_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_SEP_1vazA01 (A:14-76)
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Clans
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)
(
)
Clan
:
no clan defined [family: SEP]
(2)
Family
:
SEP
(2)
Rattus norvegicus (Rat)
(1)
1a
SEP-1vazA01
A:14-76
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Chain A
Asymmetric Unit 1
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