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1V2I
Asym. Unit
Info
Asym.Unit (157 KB)
Biol.Unit 1 (150 KB)
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(1)
Title
:
STRUCTURE OF THE HEMAGGLUTININ-NEURAMINIDASE FROM HUMAN PARAINFLUENZA VIRUS TYPE III
Authors
:
M. C. Lawrence, N. A. Borg, V. A. Streltsov, P. A. Pilling, V. C. Epa, J. N. J. L. Mckimm-Breschkin, P. M. Colman
Date
:
16 Oct 03 (Deposition) - 03 Feb 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Piv3 Hn, Native, Orthorhombic, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. C. Lawrence, N. A. Borg, V. A. Streltsov, P. A. Pilling, V. C. Epa, J. N. Varghese, J. L. Mckimm-Breschkin, P. M. Colman
Structure Of The Haemagglutinin-Neuraminidase From Human Parainfluenza Virus Type Iii
J. Mol. Biol. V. 335 1343 2004
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Hetero Components
(6, 16)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
5a: 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOP... (NDGa)
6a: PHOSPHATE ION (PO4a)
6b: PHOSPHATE ION (PO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
CA
2
Ligand/Ion
CALCIUM ION
3
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
8
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
NDG
1
Ligand/Ion
2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
6
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:308
BINDING SITE FOR RESIDUE NDG A 3081
02
AC2
SOFTWARE
ASN A:351 , NAG A:3512 , HOH A:5356 , HOH A:5378
BINDING SITE FOR RESIDUE NAG A 3511
03
AC3
SOFTWARE
TRP A:451 , NAG A:3511 , BMA A:3513 , LYS B:273 , LYS B:305
BINDING SITE FOR RESIDUE NAG A 3512
04
AC4
SOFTWARE
NAG A:3512 , MAN A:3514 , MAN A:3515
BINDING SITE FOR RESIDUE BMA A 3513
05
AC5
SOFTWARE
TRP A:451 , THR A:513 , BMA A:3513 , HOH A:5281 , HOH A:5323
BINDING SITE FOR RESIDUE MAN A 3514
06
AC6
SOFTWARE
BMA A:3513 , ASN B:307
BINDING SITE FOR RESIDUE MAN A 3515
07
AC7
SOFTWARE
LEU A:522 , ASN A:523
BINDING SITE FOR RESIDUE NAG A 5231
08
AC8
SOFTWARE
THR B:302 , ARG B:303 , ASN B:308
BINDING SITE FOR RESIDUE NAG B 3081
09
AC9
SOFTWARE
ASN B:351 , NAG B:3512
BINDING SITE FOR RESIDUE NAG B 3511
10
BC1
SOFTWARE
NAG B:3511
BINDING SITE FOR RESIDUE NAG B 3512
11
BC2
SOFTWARE
LEU B:522 , ASN B:523 , THR B:525 , NAG B:5232 , HOH B:5398
BINDING SITE FOR RESIDUE NAG B 5231
12
BC3
SOFTWARE
NAG B:5231 , HOH B:5355
BINDING SITE FOR RESIDUE NAG B 5232
13
BC4
SOFTWARE
ASP A:279 , SER A:282 , GLY A:284 , ALA A:316
BINDING SITE FOR RESIDUE CA A 1001
14
BC5
SOFTWARE
ASP B:279 , SER B:282 , GLY B:284 , ALA B:316 , HOH B:5367
BINDING SITE FOR RESIDUE CA B 1002
15
BC6
SOFTWARE
ARG A:192 , THR A:193 , GLU A:409 , ARG A:424 , HOH A:5276 , HOH A:5279 , HOH A:5310
BINDING SITE FOR RESIDUE PO4 A 2001
16
BC7
SOFTWARE
ARG B:192 , THR B:193 , GLU B:409 , ARG B:424 , TYR B:530 , HOH B:5266 , HOH B:5320 , HOH B:5378 , HOH B:5429 , HOH B:5431
BINDING SITE FOR RESIDUE PO4 B 2002
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1v2ia_ (A:)
1b: SCOP_d1v2ib_ (B:)
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Protein Domains
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(
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Organisms
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(
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Class
:
All beta proteins
(24004)
Fold
:
6-bladed beta-propeller
(327)
Superfamily
:
Sialidases
(238)
Family
:
Sialidases (neuraminidases)
(178)
Protein domain
:
Hemagglutinin-neuraminidase glycoprotein
(5)
Human parainfluenza virus type 3 [TaxId: 11216]
(5)
1a
d1v2ia_
A:
1b
d1v2ib_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Sorry, no Info available
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Asymmetric Unit 1
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