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1V1H
Asym. Unit
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Asym.Unit (110 KB)
Biol.Unit 1 (54 KB)
Biol.Unit 2 (55 KB)
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(1)
Title
:
ADENOVIRUS FIBRE SHAFT SEQUENCE N-TERMINALLY FUSED TO THE BACTERIOPHAGE T4 FIBRITIN FOLDON TRIMERISATION MOTIF WITH A SHORT LINKER
Authors
:
K. Papanikolopoulou, S. Teixeira, H. Belrhali, V. T. Forsyth, A. Mitra M. J. Van Raaij
Date
:
16 Apr 04 (Deposition) - 30 Jul 04 (Release) - 15 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Adenovirus, Chimera, Fiber Protein
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Reference
:
K. Papanikolopoulou, S. Teixeira, H. Belrhali, V. T. Forsyth, A. Mitraki, M. J. Van Raaij
Adenovirus Fibre Shaft Sequences Fold Into The Native Tripl Beta-Spiral Fold When N-Terminally Fused To The Bacteriophage T4 Fibritin Foldon Trimerisation Motif
J. Mol. Biol. V. 342 219 2004
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d1v1ha1 (A:319-392)
1b: SCOP_d1v1hb1 (B:319-392)
1c: SCOP_d1v1hc1 (C:319-392)
1d: SCOP_d1v1hd1 (D:319-392)
1e: SCOP_d1v1he1 (E:319-392)
1f: SCOP_d1v1hf1 (F:319-392)
2a: SCOP_d1v1ha2 (A:457-483)
2b: SCOP_d1v1hb2 (B:457-483)
2c: SCOP_d1v1hc2 (C:457-483)
2d: SCOP_d1v1hd2 (D:457-483)
2e: SCOP_d1v1he2 (E:457-483)
2f: SCOP_d1v1hf2 (F:457-483)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Triple beta-spiral
(6)
Superfamily
:
Fibre shaft of virus attachment proteins
(6)
Family
:
Adenovirus
(3)
Protein domain
:
Adenovirus
(3)
Human adenovirus type 2 [TaxId: 10515]
(3)
1a
d1v1ha1
A:319-392
1b
d1v1hb1
B:319-392
1c
d1v1hc1
C:319-392
1d
d1v1hd1
D:319-392
1e
d1v1he1
E:319-392
1f
d1v1hf1
F:319-392
Class
:
Coiled coil proteins
(689)
Fold
:
Parallel coiled-coil
(407)
Superfamily
:
Fibritin
(8)
Family
:
Fibritin
(8)
Protein domain
:
Fibritin
(8)
Bacteriophage T4 [TaxId: 10665]
(7)
2a
d1v1ha2
A:457-483
2b
d1v1hb2
B:457-483
2c
d1v1hc2
C:457-483
2d
d1v1hd2
D:457-483
2e
d1v1he2
E:457-483
2f
d1v1hf2
F:457-483
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1v1hE01 (E:319-392)
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Class
:
Mainly Beta
(13760)
Architecture
:
Ribbon
(789)
Topology
:
Laminin
(270)
Homologous Superfamily
:
reovirus attachment protein sigma1; domain 1
(4)
Human adenovirus type 2, bacteriophage t4.
(1)
1a
1v1hE01
E:319-392
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_Fibritin_C_1v1hF01 (F:457-482)
1b: PFAM_Fibritin_C_1v1hF02 (F:457-482)
1c: PFAM_Fibritin_C_1v1hF03 (F:457-482)
1d: PFAM_Fibritin_C_1v1hF04 (F:457-482)
1e: PFAM_Fibritin_C_1v1hF05 (F:457-482)
1f: PFAM_Fibritin_C_1v1hF06 (F:457-482)
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Clan
:
no clan defined [family: Fibritin_C]
(7)
Family
:
Fibritin_C
(7)
Enterobacteria phage T4 (Bacteriophage T4)
(4)
1a
Fibritin_C-1v1hF01
F:457-482
1b
Fibritin_C-1v1hF02
F:457-482
1c
Fibritin_C-1v1hF03
F:457-482
1d
Fibritin_C-1v1hF04
F:457-482
1e
Fibritin_C-1v1hF05
F:457-482
1f
Fibritin_C-1v1hF06
F:457-482
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Asym.Unit (110 KB)
Header - Asym.Unit
Biol.Unit 1 (54 KB)
Header - Biol.Unit 1
Biol.Unit 2 (55 KB)
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