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1V1F
Asym. Unit
Info
Asym.Unit (41 KB)
Biol.Unit 1 (67 KB)
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(1)
Title
:
STRUCTURE OF THE ARABIDOPSIS THALIANA SOS3 COMPLEXED WITH CALCIUM(II) AND MANGANESE(II) IONS
Authors
:
M. J. Sanchez-Barrena, M. Martinez-Ripoll, J. K. Zhu, A. Albert
Date
:
15 Apr 04 (Deposition) - 19 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Signalling Protein, Salt Stress Response In Plants, Calcineurin B-Like Protein, Protein Crystallography, Calcium Sensor, Ef-Hand
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Sanchez-Barrena, M. Martinez-Ripoll, J. K. Zhu, A. Albert
The Structure Of The Arabidopsis Thaliana Sos3: Molecular Mechanism Of Sensing Calcium For Salt Stress Response
J. Mol. Biol. V. 345 1253 2005
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Hetero Components
(4, 13)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
2a: IODIDE ION (IODa)
2b: IODIDE ION (IODb)
2c: IODIDE ION (IODc)
2d: IODIDE ION (IODd)
2e: IODIDE ION (IODe)
2f: IODIDE ION (IODf)
2g: IODIDE ION (IODg)
3a: MANGANESE (II) ION (MNa)
4a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
4b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
2
IOD
7
Ligand/Ion
IODIDE ION
3
MN
1
Ligand/Ion
MANGANESE (II) ION
4
MPD
2
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:47 , ILE A:51 , ASP A:53 , LEU A:55 , GLU A:60
BINDING SITE FOR RESIDUE CA A1207
02
AC2
SOFTWARE
ASP A:84 , LYS A:86 , ASN A:88 , VAL A:90 , GLU A:95
BINDING SITE FOR RESIDUE CA A1208
03
AC3
SOFTWARE
ASP A:121 , LEU A:122 , ARG A:123 , THR A:125 , PHE A:127 , GLU A:129 , GLU A:132
BINDING SITE FOR RESIDUE CA A1209
04
AC4
SOFTWARE
ASP A:165 , LYS A:167 , ASP A:169 , LYS A:171 , GLU A:176 , HOH A:2039
BINDING SITE FOR RESIDUE MN A1210
05
AC5
SOFTWARE
LYS A:86 , GLN A:163
BINDING SITE FOR RESIDUE IOD A1203
06
AC6
SOFTWARE
ARG A:15 , PRO A:194
BINDING SITE FOR RESIDUE IOD A1205
07
AC7
SOFTWARE
LYS A:114
BINDING SITE FOR RESIDUE IOD A1206
08
AC8
SOFTWARE
ASP A:21
BINDING SITE FOR RESIDUE IOD A1213
09
AC9
SOFTWARE
SER A:27 , LYS A:178
BINDING SITE FOR RESIDUE IOD A1214
10
BC1
SOFTWARE
MET A:152
BINDING SITE FOR RESIDUE IOD A1215
11
BC2
SOFTWARE
ARG A:98 , GLU A:111 , LYS A:118 , ARG A:166
BINDING SITE FOR RESIDUE MPD A1211
12
BC3
SOFTWARE
LEU A:148 , MET A:156 , ASN A:184 , HOH A:2040
BINDING SITE FOR RESIDUE MPD A1212
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (A:71-106|A:108-143|A:152-187)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CNBL4_ARATH
71-106
108-143
152-187
3
A:71-106
A:108-143
A:152-187
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1v1fa_ (A:)
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Classes
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)
(
)
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)
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
automated matches
(65)
Protein domain
:
automated matches
(65)
Thale cress (Arabidopsis thaliana) [TaxId: 3702]
(3)
1a
d1v1fa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1v1fA00 (A:15-202)
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)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Recoverin; domain 1
(474)
Homologous Superfamily
:
EF-hand
(412)
Mouse-ear cress (Arabidopsis thaliana)
(2)
1a
1v1fA00
A:15-202
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Pfam Domains
(0, 0)
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all PFAM domains
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Atom Selection
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Chain A
Asymmetric Unit 1
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