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1UZY
Asym. Unit
Info
Asym.Unit (97 KB)
Biol.Unit 1 (90 KB)
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(1)
Title
:
ERYTHRINA CRYSTAGALLI LECTIN
Authors
:
K. Turton, R. Natesh, N. Thiyagarajan, J. A. Chaddock, K. R. Acharya
Date
:
19 Mar 04 (Deposition) - 22 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Lectin, Carbohydrate Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Turton, R. Natesh, N. Thiyagarajan, J. A. Chaddock, K. R. Acharya
Crystal Structures Of Erythrina Cristagalli Lectin With Bound N-Linked Oligosaccharide And Lactose
Glycobiology V. 14 923 2004
[
close entry info
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Hetero Components
(11, 21)
Info
All Hetero Components
01a: BETA-D-GLUCOSE (BGCa)
01b: BETA-D-GLUCOSE (BGCb)
02a: BETA-D-MANNOSE (BMAa)
03a: CALCIUM ION (CAa)
03b: CALCIUM ION (CAb)
04a: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEa)
04b: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEb)
04c: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEc)
04d: 4-(2-HYDROXYETHYL)-1-PIPERAZINEETH... (EPEd)
05a: ALPHA-L-FUCOSE (FUCa)
06a: BETA-L-FUCOSE (FULa)
07a: BETA-D-GALACTOSE (GALa)
07b: BETA-D-GALACTOSE (GALb)
08a: ALPHA-D-MANNOSE (MANa)
09a: MANGANESE (II) ION (MNa)
09b: MANGANESE (II) ION (MNb)
10a: N-ACETYL-D-GLUCOSAMINE (NAGa)
10b: N-ACETYL-D-GLUCOSAMINE (NAGb)
10c: N-ACETYL-D-GLUCOSAMINE (NAGc)
10d: N-ACETYL-D-GLUCOSAMINE (NAGd)
11a: BETA-D-XYLOPYRANOSE (XYPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
2
Ligand/Ion
BETA-D-GLUCOSE
2
BMA
1
Ligand/Ion
BETA-D-MANNOSE
3
CA
2
Ligand/Ion
CALCIUM ION
4
EPE
4
Ligand/Ion
4-(2-HYDROXYETHYL)-1-PIPERAZINEETHANESULFONIC ACID
5
FUC
1
Ligand/Ion
ALPHA-L-FUCOSE
6
FUL
1
Ligand/Ion
BETA-L-FUCOSE
7
GAL
2
Ligand/Ion
BETA-D-GALACTOSE
8
MAN
1
Ligand/Ion
ALPHA-D-MANNOSE
9
MN
2
Ligand/Ion
MANGANESE (II) ION
10
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
11
XYP
1
Ligand/Ion
BETA-D-XYLOPYRANOSE
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:113 , SER A:120 , TYR A:121 , FUC A:1243 , NAG A:1244 , HOH A:2117
BINDING SITE FOR RESIDUE NAG A1242
02
AC2
SOFTWARE
NAG A:1242 , NAG A:1244
BINDING SITE FOR RESIDUE FUC A1243
03
AC3
SOFTWARE
NAG A:1242 , FUC A:1243
BINDING SITE FOR RESIDUE NAG A1244
04
AC4
SOFTWARE
ASP A:89 , TYR A:106 , GLY A:107 , PHE A:131 , ASN A:133 , GLY A:217 , ALA A:218 , GLN A:219 , ALA A:222 , BGC A:1246 , HOH A:2106 , HOH A:2211 , HOH A:2213 , HOH A:2214 , HOH A:2215
BINDING SITE FOR RESIDUE GAL A1245
05
AC5
SOFTWARE
ALA A:218 , GLN A:219 , EPE A:1241 , GAL A:1245 , HOH A:2191 , HOH A:2216 , HOH A:2217 , HOH A:2219
BINDING SITE FOR RESIDUE BGC A1246
06
AC6
SOFTWARE
ASN B:113 , TYR B:121 , FUL B:1242 , NAG B:1243 , HOH B:2217 , HOH B:2219
BINDING SITE FOR RESIDUE NAG B1241
07
AC7
SOFTWARE
NAG B:1241 , NAG B:1243 , HOH B:2220 , HOH B:2221 , HOH B:2222 , HOH B:2223
BINDING SITE FOR RESIDUE FUL B1242
08
AC8
SOFTWARE
NAG B:1241 , FUL B:1242 , BMA B:1244 , XYP B:1245 , HOH B:2223 , HOH B:2224 , HOH B:2226
BINDING SITE FOR RESIDUE NAG B1243
09
AC9
SOFTWARE
NAG B:1243 , XYP B:1245 , MAN B:1246 , HOH B:2225 , HOH B:2226 , HOH B:2227
BINDING SITE FOR RESIDUE BMA B1244
10
BC1
SOFTWARE
NAG B:1243 , BMA B:1244 , MAN B:1246 , HOH B:2226 , HOH B:2227
BINDING SITE FOR RESIDUE XYP B1245
11
BC2
SOFTWARE
PRO B:138 , GLN B:139 , VAL B:140 , BMA B:1244 , XYP B:1245 , HOH B:2229 , HOH B:2231
BINDING SITE FOR RESIDUE MAN B1246
12
BC3
SOFTWARE
EPE A:1240 , ASP B:89 , GLY B:107 , PHE B:131 , ASN B:133 , GLY B:217 , ALA B:218 , GLN B:219 , ALA B:222 , BGC B:1248 , HOH B:2107 , HOH B:2124 , HOH B:2146 , HOH B:2232
BINDING SITE FOR RESIDUE GAL B1247
13
BC4
SOFTWARE
LYS A:36 , ASN A:38 , ASN A:40 , EPE A:1240 , HOH A:2049 , ALA B:218 , GLN B:219 , GAL B:1247 , HOH B:2233 , HOH B:2234
BINDING SITE FOR RESIDUE BGC B1248
14
BC5
SOFTWARE
ASP A:129 , PHE A:131 , ASN A:133 , ASP A:136 , HOH A:2094 , HOH A:2105
BINDING SITE FOR RESIDUE CA A1247
15
BC6
SOFTWARE
GLU A:127 , ASP A:129 , ASP A:136 , HIS A:142 , HOH A:2220 , HOH A:2221
BINDING SITE FOR RESIDUE MN A1248
16
BC7
SOFTWARE
ASP B:129 , PHE B:131 , ASN B:133 , ASP B:136 , HOH B:2110 , HOH B:2123
BINDING SITE FOR RESIDUE CA B1249
17
BC8
SOFTWARE
GLU B:127 , ASP B:129 , ASP B:136 , HIS B:142 , HOH B:2235 , HOH B:2236
BINDING SITE FOR RESIDUE MN B1250
18
BC9
SOFTWARE
TRP A:45 , ARG A:220 , HOH A:2209 , TYR B:106 , ALA B:218 , EPE B:1240 , GAL B:1247 , BGC B:1248 , HOH B:2061 , HOH B:2125
BINDING SITE FOR RESIDUE EPE A1240
19
CC1
SOFTWARE
TRP A:135 , BGC A:1246 , HOH A:2210 , HOH A:2211 , HOH A:2219 , GLN B:80 , TYR B:82 , ASN B:162 , HOH B:2096
BINDING SITE FOR RESIDUE EPE A1241
20
CC2
SOFTWARE
PRO A:134 , ASP A:136 , PRO A:138 , GLU B:79 , GLY B:163 , GLN B:164 , VAL B:165 , TYR B:229 , HOH B:2171 , HOH B:2213 , HOH B:2215 , HOH B:2216
BINDING SITE FOR RESIDUE EPE B1239
21
CC3
SOFTWARE
EPE A:1240 , ASN B:38 , ALA B:44 , TRP B:45 , ASP B:46
BINDING SITE FOR RESIDUE EPE B1240
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1uzya_ (A:)
1b: SCOP_d1uzyb_ (B:)
View:
Select:
Label:
Classes
(
)
(
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Folds
(
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(
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Superfamilies
(
)
(
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Families
(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
Legume lectin
(110)
Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
(5)
1a
d1uzya_
A:
1b
d1uzyb_
B:
[
close SCOP info
]
CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1uzyA00 (A:2-240)
1b: CATH_1uzyB00 (B:1-239)
View:
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Classes
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(
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Architectures
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Topologies
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(
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Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.200, no name defined]
(421)
Cockspur coral tree (Erythrina crista-galli)
(5)
1a
1uzyA00
A:2-240
1b
1uzyB00
B:1-239
[
close CATH info
]
Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Lectin_legB_1uzyB01 (B:2-234)
1b: PFAM_Lectin_legB_1uzyB02 (B:2-234)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Concanavalin
(293)
Family
:
Lectin_legB
(93)
Erythrina crista-galli (Cockspur coral tree) (Micropteryx crista-galli)
(3)
1a
Lectin_legB-1uzyB01
B:2-234
1b
Lectin_legB-1uzyB02
B:2-234
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]
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