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1UWA
Biol. Unit 1
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Asym.Unit (838 KB)
Biol.Unit 1 (822 KB)
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(1)
Title
:
L290F MUTANT RUBISCO FROM CHLAMYDOMONAS
Authors
:
S. Karkehabadi, T. C. Taylor, R. J. Spreitzer, I. Andersson
Date
:
03 Feb 04 (Deposition) - 12 Jan 05 (Release) - 12 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,E,F,H,I,J,K,M,O,P,R,T,V,W
Biol. Unit 1: A,B,C,E,F,H,I,J,K,M,O,P,R,T,V,W (1x)
Keywords
:
Lyase, Rubisco, Photosynthesis, Photorespiration, Oxidoreductase, Monooxygenase, Carbon Dioxide Fixation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Karkehabadi, T. C. Taylor, R. J. Spreitzer, I. Andersson
Altered Intersubunit Interactions In Crystal Structures Of Catalytically Compromised Ribulose-1, 5-Bisphosphate Carboxylase/Oxygenase
Biochemistry V. 44 113 2005
[
close entry info
]
Hetero Components
(5, 107)
Info
All Hetero Components
1a: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPa)
1b: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPb)
1c: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPc)
1d: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPd)
1e: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPe)
1f: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPf)
1g: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPg)
1h: 2-CARBOXYARABINITOL-1,5-DIPHOSPHAT... (CAPh)
2a: 1,2-ETHANEDIOL (EDOa)
2aa: 1,2-ETHANEDIOL (EDOaa)
2ab: 1,2-ETHANEDIOL (EDOab)
2ac: 1,2-ETHANEDIOL (EDOac)
2ad: 1,2-ETHANEDIOL (EDOad)
2ae: 1,2-ETHANEDIOL (EDOae)
2af: 1,2-ETHANEDIOL (EDOaf)
2ag: 1,2-ETHANEDIOL (EDOag)
2ah: 1,2-ETHANEDIOL (EDOah)
2ai: 1,2-ETHANEDIOL (EDOai)
2aj: 1,2-ETHANEDIOL (EDOaj)
2ak: 1,2-ETHANEDIOL (EDOak)
2al: 1,2-ETHANEDIOL (EDOal)
2am: 1,2-ETHANEDIOL (EDOam)
2an: 1,2-ETHANEDIOL (EDOan)
2ao: 1,2-ETHANEDIOL (EDOao)
2ap: 1,2-ETHANEDIOL (EDOap)
2aq: 1,2-ETHANEDIOL (EDOaq)
2ar: 1,2-ETHANEDIOL (EDOar)
2as: 1,2-ETHANEDIOL (EDOas)
2at: 1,2-ETHANEDIOL (EDOat)
2au: 1,2-ETHANEDIOL (EDOau)
2av: 1,2-ETHANEDIOL (EDOav)
2aw: 1,2-ETHANEDIOL (EDOaw)
2ax: 1,2-ETHANEDIOL (EDOax)
2ay: 1,2-ETHANEDIOL (EDOay)
2az: 1,2-ETHANEDIOL (EDOaz)
2b: 1,2-ETHANEDIOL (EDOb)
2ba: 1,2-ETHANEDIOL (EDOba)
2bb: 1,2-ETHANEDIOL (EDObb)
2bc: 1,2-ETHANEDIOL (EDObc)
2bd: 1,2-ETHANEDIOL (EDObd)
2be: 1,2-ETHANEDIOL (EDObe)
2bf: 1,2-ETHANEDIOL (EDObf)
2bg: 1,2-ETHANEDIOL (EDObg)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
2q: 1,2-ETHANEDIOL (EDOq)
2r: 1,2-ETHANEDIOL (EDOr)
2s: 1,2-ETHANEDIOL (EDOs)
2t: 1,2-ETHANEDIOL (EDOt)
2u: 1,2-ETHANEDIOL (EDOu)
2v: 1,2-ETHANEDIOL (EDOv)
2w: 1,2-ETHANEDIOL (EDOw)
2x: 1,2-ETHANEDIOL (EDOx)
2y: 1,2-ETHANEDIOL (EDOy)
2z: 1,2-ETHANEDIOL (EDOz)
3a: 4-HYDROXYPROLINE (HYPa)
3b: 4-HYDROXYPROLINE (HYPb)
3c: 4-HYDROXYPROLINE (HYPc)
3d: 4-HYDROXYPROLINE (HYPd)
3e: 4-HYDROXYPROLINE (HYPe)
3f: 4-HYDROXYPROLINE (HYPf)
3g: 4-HYDROXYPROLINE (HYPg)
3h: 4-HYDROXYPROLINE (HYPh)
3i: 4-HYDROXYPROLINE (HYPi)
3j: 4-HYDROXYPROLINE (HYPj)
3k: 4-HYDROXYPROLINE (HYPk)
3l: 4-HYDROXYPROLINE (HYPl)
3m: 4-HYDROXYPROLINE (HYPm)
3n: 4-HYDROXYPROLINE (HYPn)
3o: 4-HYDROXYPROLINE (HYPo)
3p: 4-HYDROXYPROLINE (HYPp)
4a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
4b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
4c: LYSINE NZ-CARBOXYLIC ACID (KCXc)
4d: LYSINE NZ-CARBOXYLIC ACID (KCXd)
4e: LYSINE NZ-CARBOXYLIC ACID (KCXe)
4f: LYSINE NZ-CARBOXYLIC ACID (KCXf)
4g: LYSINE NZ-CARBOXYLIC ACID (KCXg)
4h: LYSINE NZ-CARBOXYLIC ACID (KCXh)
5a: MAGNESIUM ION (MGa)
5b: MAGNESIUM ION (MGb)
5c: MAGNESIUM ION (MGc)
5d: MAGNESIUM ION (MGd)
5e: MAGNESIUM ION (MGe)
5f: MAGNESIUM ION (MGf)
5g: MAGNESIUM ION (MGg)
5h: MAGNESIUM ION (MGh)
6a: S-METHYLCYSTEINE (SMCa)
6b: S-METHYLCYSTEINE (SMCb)
6c: S-METHYLCYSTEINE (SMCc)
6d: S-METHYLCYSTEINE (SMCd)
6e: S-METHYLCYSTEINE (SMCe)
6f: S-METHYLCYSTEINE (SMCf)
6g: S-METHYLCYSTEINE (SMCg)
6h: S-METHYLCYSTEINE (SMCh)
6i: S-METHYLCYSTEINE (SMCi)
6j: S-METHYLCYSTEINE (SMCj)
6k: S-METHYLCYSTEINE (SMCk)
6l: S-METHYLCYSTEINE (SMCl)
6m: S-METHYLCYSTEINE (SMCm)
6n: S-METHYLCYSTEINE (SMCn)
6o: S-METHYLCYSTEINE (SMCo)
6p: S-METHYLCYSTEINE (SMCp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CAP
8
Ligand/Ion
2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
2
EDO
59
Ligand/Ion
1,2-ETHANEDIOL
3
HYP
16
Mod. Amino Acid
4-HYDROXYPROLINE
4
KCX
8
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
5
MG
-1
Ligand/Ion
MAGNESIUM ION
6
SMC
16
Mod. Amino Acid
S-METHYLCYSTEINE
[
close Hetero Component info
]
Sites
(75, 75)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
75: IC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
KCX A:201 , ASP A:203 , GLU A:204 , CAP A:502
BINDING SITE FOR RESIDUE MG A 476
02
AC2
SOFTWARE
LYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , CAP B:502
BINDING SITE FOR RESIDUE MG B 476
03
AC3
SOFTWARE
KCX E:201 , ASP E:203 , GLU E:204 , CAP E:502
BINDING SITE FOR RESIDUE MG E 476
04
AC4
SOFTWARE
KCX H:201 , ASP H:203 , GLU H:204 , CAP H:502
BINDING SITE FOR RESIDUE MG H 476
05
AC5
SOFTWARE
KCX K:201 , ASP K:203 , GLU K:204 , CAP K:502
BINDING SITE FOR RESIDUE MG K 476
06
AC6
SOFTWARE
KCX O:201 , ASP O:203 , GLU O:204 , CAP O:502
BINDING SITE FOR RESIDUE MG O 476
07
AC7
SOFTWARE
LYS R:177 , KCX R:201 , ASP R:203 , GLU R:204 , CAP R:502
BINDING SITE FOR RESIDUE MG R 476
08
AC8
SOFTWARE
KCX V:201 , ASP V:203 , GLU V:204 , CAP V:502
BINDING SITE FOR RESIDUE MG V 476
09
AC9
SOFTWARE
THR A:173 , LYS A:175 , LYS A:177 , KCX A:201 , ASP A:203 , GLU A:204 , HIS A:294 , ARG A:295 , HIS A:327 , LYS A:334 , LEU A:335 , SER A:379 , GLY A:380 , GLY A:381 , GLY A:403 , GLY A:404 , MG A:501 , HOH A:667 , HOH A:639 , HOH A:646 , HOH A:607 , HOH A:627 , HOH A:648 , GLU O:60 , THR O:65 , TRP O:66 , ASN O:123 , HOH O:676
BINDING SITE FOR RESIDUE CAP A 477
10
BC1
SOFTWARE
THR B:173 , LYS B:175 , LYS B:177 , KCX B:201 , ASP B:203 , GLU B:204 , HIS B:294 , ARG B:295 , HIS B:327 , LYS B:334 , LEU B:335 , SER B:379 , GLY B:380 , GLY B:381 , GLY B:403 , GLY B:404 , MG B:501 , HOH B:689 , HOH B:713 , HOH B:627 , HOH B:609 , HOH B:633 , HOH B:640 , GLU E:60 , THR E:65 , TRP E:66 , ASN E:123 , HOH E:705 , HOH E:708
BINDING SITE FOR RESIDUE CAP B 477
11
BC2
SOFTWARE
TYR A:24 , GLY A:64 , THR A:68 , VAL A:69 , ASP A:72 , LEU A:77 , HOH A:677 , HOH A:654 , HOH A:713
BINDING SITE FOR RESIDUE EDO D 1
12
BC3
SOFTWARE
LYS A:18 , THR A:65 , TRP A:66 , THR A:67 , THR A:68 , HOH A:683 , HOH A:677
BINDING SITE FOR RESIDUE EDO D 2
13
BC4
SOFTWARE
GLU A:52
BINDING SITE FOR RESIDUE EDO D 3
14
BC5
SOFTWARE
HIS A:298 , ASP A:302 , ASP A:473 , HOH A:765 , HOH A:657
BINDING SITE FOR RESIDUE EDO D 4
15
BC6
SOFTWARE
TYR B:24 , GLY B:64 , THR B:68 , VAL B:69 , ASP B:72 , LEU B:77 , HOH B:694 , HOH B:686 , HOH B:620
BINDING SITE FOR RESIDUE EDO D 5
16
BC7
SOFTWARE
LYS B:18 , THR B:65 , THR B:67 , THR B:68 , HOH B:684 , HOH B:686
BINDING SITE FOR RESIDUE EDO D 6
17
BC8
SOFTWARE
GLU B:52 , HOH B:634
BINDING SITE FOR RESIDUE EDO D 7
18
BC9
SOFTWARE
LYS B:466 , PHE B:467 , GLU B:468 , PHE B:469 , HOH B:617
BINDING SITE FOR RESIDUE EDO D 8
19
CC1
SOFTWARE
ARG B:295 , GLU B:336 , PHE B:345 , ASP B:473 , HOH B:772
BINDING SITE FOR RESIDUE EDO D 9
20
CC2
SOFTWARE
HOH E:655 , TYR E:24 , GLY E:64 , THR E:68 , VAL E:69 , ASP E:72 , HOH E:667 , HOH E:692
BINDING SITE FOR RESIDUE EDO D 10
21
CC3
SOFTWARE
GLY E:16 , LYS E:18 , THR E:65 , TRP E:66 , THR E:67 , THR E:68 , HOH E:674 , HOH E:667
BINDING SITE FOR RESIDUE EDO D 11
22
CC4
SOFTWARE
HOH B:634 , LYS E:466 , GLU E:468 , PHE E:469
BINDING SITE FOR RESIDUE EDO D 12
23
CC5
SOFTWARE
HOH E:753 , HOH E:605 , ARG E:295 , ASP E:473
BINDING SITE FOR RESIDUE EDO D 13
24
CC6
SOFTWARE
TYR A:226 , ALA A:230 , HOH F:322 , HOH F:323 , LYS F:49 , GLU F:55 , ASP F:69
BINDING SITE FOR RESIDUE EDO D 14
25
CC7
SOFTWARE
GLY F:37 , TRP F:38 , ILE F:39 , GLY F:82
BINDING SITE FOR RESIDUE EDO D 15
26
CC8
SOFTWARE
HOH H:727 , HOH H:607 , LEU H:270 , LEU V:270
BINDING SITE FOR RESIDUE EDO D 16
27
CC9
SOFTWARE
HOH H:606 , VAL H:17 , LYS H:18 , TRP H:66 , THR H:67 , THR H:68 , HOH H:689
BINDING SITE FOR RESIDUE EDO D 18
28
DC1
SOFTWARE
HOH H:768 , GLU H:52
BINDING SITE FOR RESIDUE EDO D 19
29
DC2
SOFTWARE
HOH H:736 , LYS H:466 , GLU H:468 , PHE H:469
BINDING SITE FOR RESIDUE EDO D 20
30
DC3
SOFTWARE
HOH H:776 , ARG H:295 , GLU H:336 , ASP H:473
BINDING SITE FOR RESIDUE EDO D 21
31
DC4
SOFTWARE
EDO K:504 , HOH K:621 , HOH K:692 , TYR K:24 , THR K:68 , VAL K:69 , ASP K:72 , HOH K:682
BINDING SITE FOR RESIDUE EDO D 22
32
DC5
SOFTWARE
EDO K:503 , HOH K:661 , HOH K:692 , VAL K:17 , LYS K:18 , THR K:65 , TRP K:66 , THR K:67 , THR K:68
BINDING SITE FOR RESIDUE EDO D 23
33
DC6
SOFTWARE
GLY P:37 , TRP P:38 , ILE P:39 , GLY P:82 , CYS P:83
BINDING SITE FOR RESIDUE EDO D 24
34
DC7
SOFTWARE
EDO O:504 , HOH O:652 , TYR O:24 , GLY O:64 , THR O:68 , VAL O:69 , ASP O:72 , HOH O:703 , HOH O:639
BINDING SITE FOR RESIDUE EDO D 25
35
DC8
SOFTWARE
EDO O:503 , HOH O:652 , LYS O:18 , THR O:65 , TRP O:66 , THR O:67 , THR O:68 , HOH O:649
BINDING SITE FOR RESIDUE EDO D 26
36
DC9
SOFTWARE
PHE A:469 , HOH A:619 , GLU O:52
BINDING SITE FOR RESIDUE EDO D 27
37
EC1
SOFTWARE
HOH O:604 , LYS O:466 , PHE O:467 , GLU O:468 , PHE O:469
BINDING SITE FOR RESIDUE EDO D 28
38
EC2
SOFTWARE
TYR B:226 , LYS T:49 , GLU T:55 , SER T:56 , ASP T:69
BINDING SITE FOR RESIDUE EDO D 29
39
EC3
SOFTWARE
HOH R:689 , LEU K:270 , LEU R:270 , HOH R:725
BINDING SITE FOR RESIDUE EDO D 30
40
EC4
SOFTWARE
LEU B:270 , HOH B:675 , HOH B:681 , LEU E:270
BINDING SITE FOR RESIDUE EDO D 31
41
EC5
SOFTWARE
LEU A:270 , HOH A:736 , HOH A:651 , LEU O:270
BINDING SITE FOR RESIDUE EDO D 32
42
EC6
SOFTWARE
HOH R:654 , LYS R:18 , THR R:65 , TRP R:66 , THR R:67 , THR R:68 , HOH R:684
BINDING SITE FOR RESIDUE EDO D 33
43
EC7
SOFTWARE
GLU R:52
BINDING SITE FOR RESIDUE EDO D 34
44
EC8
SOFTWARE
HOH R:671 , LYS R:466 , PHE R:467 , GLU R:468 , PHE R:469
BINDING SITE FOR RESIDUE EDO D 35
45
EC9
SOFTWARE
HOH V:737 , HOH V:659 , TYR V:24 , GLY V:64 , THR V:68 , VAL V:69 , ASP V:72 , LEU V:77 , HOH V:638
BINDING SITE FOR RESIDUE EDO D 36
46
FC1
SOFTWARE
HOH V:659 , GLY V:16 , VAL V:17 , LYS V:18 , THR V:65 , THR V:67 , THR V:68 , HOH V:624
BINDING SITE FOR RESIDUE EDO D 37
47
FC2
SOFTWARE
GLU V:52
BINDING SITE FOR RESIDUE EDO D 38
48
FC3
SOFTWARE
HOH V:669 , LYS V:466 , PHE V:467 , GLU V:468 , PHE V:469 , HOH V:774
BINDING SITE FOR RESIDUE EDO D 39
49
FC4
SOFTWARE
HOH V:804 , GLY V:337 , GLU V:338 , VAL V:341 , ASP V:473
BINDING SITE FOR RESIDUE EDO D 40
50
FC5
SOFTWARE
GLY J:37 , TRP J:38 , ILE J:39 , GLY J:82
BINDING SITE FOR RESIDUE EDO D 41
51
FC6
SOFTWARE
ALA A:11 , HOH A:778 , GLY M:37 , ARG M:84
BINDING SITE FOR RESIDUE EDO D 42
52
FC7
SOFTWARE
GLY T:37 , TRP T:38 , ILE T:39 , PHE T:81 , GLY T:82 , CYS T:83
BINDING SITE FOR RESIDUE EDO D 43
53
FC8
SOFTWARE
LYS A:466 , GLU A:468 , PHE A:469 , HOH A:619 , HOH A:748
BINDING SITE FOR RESIDUE EDO D 44
54
FC9
SOFTWARE
HOH R:671 , TYR K:20 , GLU K:52
BINDING SITE FOR RESIDUE EDO D 45
55
GC1
SOFTWARE
HOH K:660 , LYS K:466 , GLU K:468 , PHE K:469
BINDING SITE FOR RESIDUE EDO D 46
56
GC2
SOFTWARE
GLU K:336 , ASP K:473 , HOH K:679
BINDING SITE FOR RESIDUE EDO D 47
57
GC3
SOFTWARE
HOH B:617 , GLU E:52 , ALA E:129
BINDING SITE FOR RESIDUE EDO D 48
58
GC4
SOFTWARE
HOH I:328 , LYS I:49 , GLU I:55 , HOH I:322 , TYR K:226 , ALA K:230
BINDING SITE FOR RESIDUE EDO D 49
59
GC5
SOFTWARE
GLY I:37 , TRP I:38 , ILE I:39 , PHE I:81 , GLY I:82
BINDING SITE FOR RESIDUE EDO D 50
60
GC6
SOFTWARE
HOH P:339 , LYS P:49 , GLU P:55 , HOH P:307 , TYR V:226
BINDING SITE FOR RESIDUE EDO D 51
61
GC7
SOFTWARE
ALA B:11 , HOH B:732 , HOH B:837 , ARG W:84
BINDING SITE FOR RESIDUE EDO D 52
62
GC8
SOFTWARE
HOH H:698 , TYR H:24 , THR H:68 , VAL H:69 , ASP H:72 , LEU H:77 , HOH H:689 , HOH H:730
BINDING SITE FOR RESIDUE EDO D 53
63
GC9
SOFTWARE
HOH R:654 , HOH R:683 , TYR R:24 , GLY R:64 , THR R:68 , VAL R:69 , ASP R:72 , HOH R:715
BINDING SITE FOR RESIDUE EDO D 54
64
HC1
SOFTWARE
HOH R:735 , ARG R:295 , GLU R:336 , ASP R:473 , HOH R:691
BINDING SITE FOR RESIDUE EDO D 56
65
HC2
SOFTWARE
ARG O:295 , GLU O:336 , PHE O:345 , ASP O:473 , HOH O:782 , HOH O:671
BINDING SITE FOR RESIDUE EDO D 57
66
HC3
SOFTWARE
LYS C:49 , GLU C:55 , SER C:56 , ASP C:69 , HOH C:319 , HOH C:336 , TYR H:226 , LYS H:227
BINDING SITE FOR RESIDUE EDO D 58
67
HC4
SOFTWARE
GLY C:37 , TRP C:38 , GLY C:82
BINDING SITE FOR RESIDUE EDO D 59
68
HC5
SOFTWARE
LYS J:49 , GLU J:55 , HOH J:306 , TYR R:226 , ALA R:230
BINDING SITE FOR RESIDUE EDO D 61
69
HC6
SOFTWARE
LYS M:49 , GLU M:55 , HOH M:318 , TYR O:226
BINDING SITE FOR RESIDUE EDO D 62
70
HC7
SOFTWARE
GLU B:60 , THR B:65 , TRP B:66 , ASN B:123 , HOH B:722 , HOH B:695 , THR E:173 , LYS E:175 , LYS E:177 , KCX E:201 , ASP E:203 , GLU E:204 , HIS E:294 , ARG E:295 , HIS E:327 , LYS E:334 , LEU E:335 , SER E:379 , GLY E:380 , GLY E:381 , GLY E:403 , GLY E:404 , MG E:501 , HOH E:639 , HOH E:634 , HOH E:646 , HOH E:606 , HOH E:700 , HOH E:696 , HOH E:608
BINDING SITE FOR RESIDUE CAP E 477
71
HC8
SOFTWARE
THR H:173 , LYS H:175 , LYS H:177 , KCX H:201 , ASP H:203 , GLU H:204 , HIS H:294 , ARG H:295 , HIS H:327 , LYS H:334 , LEU H:335 , SER H:379 , GLY H:380 , GLY H:381 , GLY H:403 , GLY H:404 , MG H:501 , HOH H:633 , HOH H:669 , HOH H:651 , HOH H:611 , HOH H:665 , HOH H:640 , GLU V:60 , THR V:65 , TRP V:66 , ASN V:123 , HOH V:721 , HOH V:727 , HOH V:726
BINDING SITE FOR RESIDUE CAP H 477
72
HC9
SOFTWARE
THR K:173 , LYS K:175 , LYS K:177 , KCX K:201 , ASP K:203 , GLU K:204 , HIS K:294 , ARG K:295 , HIS K:327 , LYS K:334 , LEU K:335 , SER K:379 , GLY K:380 , GLY K:381 , GLY K:403 , GLY K:404 , MG K:501 , HOH K:670 , HOH K:674 , HOH K:685 , HOH K:676 , HOH K:720 , HOH K:626 , GLU R:60 , THR R:65 , TRP R:66 , ASN R:123 , HOH R:644 , HOH R:711 , HOH R:639
BINDING SITE FOR RESIDUE CAP K 477
73
IC1
SOFTWARE
GLU A:60 , THR A:65 , TRP A:66 , ASN A:123 , HOH A:744 , THR O:173 , LYS O:175 , LYS O:177 , KCX O:201 , ASP O:203 , GLU O:204 , HIS O:294 , ARG O:295 , HIS O:327 , LYS O:334 , LEU O:335 , SER O:379 , GLY O:380 , GLY O:381 , GLY O:403 , GLY O:404 , MG O:501 , HOH O:707 , HOH O:717 , HOH O:695 , HOH O:631 , HOH O:613 , HOH O:607 , HOH O:668 , HOH O:603
BINDING SITE FOR RESIDUE CAP O 477
74
IC2
SOFTWARE
GLU K:60 , THR K:65 , TRP K:66 , ASN K:123 , HOH K:693 , THR R:173 , LYS R:175 , LYS R:177 , KCX R:201 , ASP R:203 , GLU R:204 , HIS R:294 , ARG R:295 , HIS R:327 , LYS R:334 , LEU R:335 , SER R:379 , GLY R:380 , GLY R:381 , GLY R:403 , GLY R:404 , MG R:501 , HOH R:627 , HOH R:625 , HOH R:655 , HOH R:702 , HOH R:696 , HOH R:667
BINDING SITE FOR RESIDUE CAP R 477
75
IC3
SOFTWARE
GLU H:60 , THR H:65 , TRP H:66 , ASN H:123 , THR V:173 , LYS V:175 , LYS V:177 , KCX V:201 , ASP V:203 , GLU V:204 , HIS V:294 , ARG V:295 , HIS V:327 , LYS V:334 , LEU V:335 , SER V:379 , GLY V:380 , GLY V:381 , GLY V:403 , GLY V:404 , MG V:501 , HOH V:697 , HOH V:686 , HOH V:648 , HOH V:631 , HOH V:751 , HOH V:674 , HOH V:699
BINDING SITE FOR RESIDUE CAP V 477
[
close Site info
]
SAPs(SNPs)/Variants
(1, 8)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_RBL_CHLRE_001 (P46P, chain A/B/E/H/K/O/R/V, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_RBL_CHLRE_001
*
L
46
P
RBL_CHLRE
---
---
A/B/E/H/K/O/R/V
P
46
P
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 8)
Info
All PROSITE Patterns/Profiles
1: RUBISCO_LARGE (A:196-204,B:196-204,E:196-204,H:19...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RUBISCO_LARGE
PS00157
Ribulose bisphosphate carboxylase large chain active site.
RBL_CHLRE
196-204
8
A:196-204
B:196-204
E:196-204
H:196-204
K:196-204
O:196-204
R:196-204
V:196-204
[
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 24)
Info
All SCOP Domains
1a: SCOP_d1uwaa2 (A:11-149)
1b: SCOP_d1uwab2 (B:11-149)
1c: SCOP_d1uwae2 (E:7-149)
1d: SCOP_d1uwah2 (H:7-149)
1e: SCOP_d1uwak2 (K:7-149)
1f: SCOP_d1uwao2 (O:7-149)
1g: SCOP_d1uwar2 (R:11-149)
1h: SCOP_d1uwav2 (V:11-149)
2a: SCOP_d1uwac_ (C:)
2b: SCOP_d1uwaf_ (F:)
2c: SCOP_d1uwai_ (I:)
2d: SCOP_d1uwaj_ (J:)
2e: SCOP_d1uwam_ (M:)
2f: SCOP_d1uwap_ (P:)
2g: SCOP_d1uwat_ (T:)
2h: SCOP_d1uwaw_ (W:)
3a: SCOP_d1uwaa1 (A:150-475)
3b: SCOP_d1uwab1 (B:150-475)
3c: SCOP_d1uwae1 (E:150-475)
3d: SCOP_d1uwah1 (H:150-475)
3e: SCOP_d1uwak1 (K:150-475)
3f: SCOP_d1uwao1 (O:150-475)
3g: SCOP_d1uwar1 (R:150-475)
3h: SCOP_d1uwav1 (V:150-475)
View:
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Classes
(
)
(
)
Folds
(
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
RuBisCO, large subunit, small (N-terminal) domain
(66)
Family
:
automated matches
(27)
Protein domain
:
automated matches
(27)
Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
(9)
1a
d1uwaa2
A:11-149
1b
d1uwab2
B:11-149
1c
d1uwae2
E:7-149
1d
d1uwah2
H:7-149
1e
d1uwak2
K:7-149
1f
d1uwao2
O:7-149
1g
d1uwar2
R:11-149
1h
d1uwav2
V:11-149
Fold
:
RuBisCO, small subunit
(44)
Superfamily
:
RuBisCO, small subunit
(44)
Family
:
RuBisCO, small subunit
(44)
Protein domain
:
automated matches
(16)
Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
(7)
2a
d1uwac_
C:
2b
d1uwaf_
F:
2c
d1uwai_
I:
2d
d1uwaj_
J:
2e
d1uwam_
M:
2f
d1uwap_
P:
2g
d1uwat_
T:
2h
d1uwaw_
W:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
RuBisCo, C-terminal domain
(66)
Family
:
RuBisCo, large subunit, C-terminal domain
(56)
Protein domain
:
automated matches
(16)
Green alga (Chlamydomonas reinhardtii) [TaxId: 3055]
(9)
3a
d1uwaa1
A:150-475
3b
d1uwab1
B:150-475
3c
d1uwae1
E:150-475
3d
d1uwah1
H:150-475
3e
d1uwak1
K:150-475
3f
d1uwao1
O:150-475
3g
d1uwar1
R:150-475
3h
d1uwav1
V:150-475
[
close SCOP info
]
CATH Domains
(3, 24)
Info
all CATH domains
1a: CATH_1uwaA01 (A:22-148)
1b: CATH_1uwaB01 (B:22-148)
1c: CATH_1uwaE01 (E:22-148)
1d: CATH_1uwaH01 (H:22-148)
1e: CATH_1uwaK01 (K:22-148)
1f: CATH_1uwaO01 (O:22-148)
1g: CATH_1uwaR01 (R:22-148)
1h: CATH_1uwaV01 (V:22-148)
2a: CATH_1uwaC00 (C:1-140)
2b: CATH_1uwaF00 (F:1-140)
2c: CATH_1uwaI00 (I:1-140)
2d: CATH_1uwaJ00 (J:1-140)
2e: CATH_1uwaM00 (M:1-140)
2f: CATH_1uwaP00 (P:1-140)
2g: CATH_1uwaT00 (T:1-140)
2h: CATH_1uwaW00 (W:1-140)
3a: CATH_1uwaA02 (A:149-462)
3b: CATH_1uwaB02 (B:149-462)
3c: CATH_1uwaE02 (E:149-462)
3d: CATH_1uwaH02 (H:149-462)
3e: CATH_1uwaK02 (K:149-462)
3f: CATH_1uwaO02 (O:149-462)
3g: CATH_1uwaR02 (R:149-462)
3h: CATH_1uwaV02 (V:149-462)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.150, no name defined]
(49)
Chlamydomonas reinhardtii. Organism_taxid: 3055.
(5)
1a
1uwaA01
A:22-148
1b
1uwaB01
B:22-148
1c
1uwaE01
E:22-148
1d
1uwaH01
H:22-148
1e
1uwaK01
K:22-148
1f
1uwaO01
O:22-148
1g
1uwaR01
R:22-148
1h
1uwaV01
V:22-148
Topology
:
Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase
(42)
Homologous Superfamily
:
[code=3.30.190.10, no name defined]
(35)
Chlamydomonas reinhardtii. Organism_taxid: 3055.
(5)
2a
1uwaC00
C:1-140
2b
1uwaF00
F:1-140
2c
1uwaI00
I:1-140
2d
1uwaJ00
J:1-140
2e
1uwaM00
M:1-140
2f
1uwaP00
P:1-140
2g
1uwaT00
T:1-140
2h
1uwaW00
W:1-140
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Rubisco
(49)
Chlamydomonas reinhardtii. Organism_taxid: 3055.
(5)
3a
1uwaA02
A:149-462
3b
1uwaB02
B:149-462
3c
1uwaE02
E:149-462
3d
1uwaH02
H:149-462
3e
1uwaK02
K:149-462
3f
1uwaO02
O:149-462
3g
1uwaR02
R:149-462
3h
1uwaV02
V:149-462
[
close CATH info
]
Pfam Domains
(3, 24)
Info
all PFAM domains
1a: PFAM_RuBisCO_large_1uwaV01 (V:154-462)
1b: PFAM_RuBisCO_large_1uwaV02 (V:154-462)
1c: PFAM_RuBisCO_large_1uwaV03 (V:154-462)
1d: PFAM_RuBisCO_large_1uwaV04 (V:154-462)
1e: PFAM_RuBisCO_large_1uwaV05 (V:154-462)
1f: PFAM_RuBisCO_large_1uwaV06 (V:154-462)
1g: PFAM_RuBisCO_large_1uwaV07 (V:154-462)
1h: PFAM_RuBisCO_large_1uwaV08 (V:154-462)
2a: PFAM_RuBisCO_large_N_1uwaV09 (V:21-146)
2b: PFAM_RuBisCO_large_N_1uwaV10 (V:21-146)
2c: PFAM_RuBisCO_large_N_1uwaV11 (V:21-146)
2d: PFAM_RuBisCO_large_N_1uwaV12 (V:21-146)
2e: PFAM_RuBisCO_large_N_1uwaV13 (V:21-146)
2f: PFAM_RuBisCO_large_N_1uwaV14 (V:21-146)
2g: PFAM_RuBisCO_large_N_1uwaV15 (V:21-146)
2h: PFAM_RuBisCO_large_N_1uwaV16 (V:21-146)
3a: PFAM_RuBisCO_small_1uwaW01 (W:11-127)
3b: PFAM_RuBisCO_small_1uwaW02 (W:11-127)
3c: PFAM_RuBisCO_small_1uwaW03 (W:11-127)
3d: PFAM_RuBisCO_small_1uwaW04 (W:11-127)
3e: PFAM_RuBisCO_small_1uwaW05 (W:11-127)
3f: PFAM_RuBisCO_small_1uwaW06 (W:11-127)
3g: PFAM_RuBisCO_small_1uwaW07 (W:11-127)
3h: PFAM_RuBisCO_small_1uwaW08 (W:11-127)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: RuBisCO_large]
(36)
Family
:
RuBisCO_large
(36)
Chlamydomonas reinhardtii (Chlamydomonas smithii)
(10)
1a
RuBisCO_large-1uwaV01
V:154-462
1b
RuBisCO_large-1uwaV02
V:154-462
1c
RuBisCO_large-1uwaV03
V:154-462
1d
RuBisCO_large-1uwaV04
V:154-462
1e
RuBisCO_large-1uwaV05
V:154-462
1f
RuBisCO_large-1uwaV06
V:154-462
1g
RuBisCO_large-1uwaV07
V:154-462
1h
RuBisCO_large-1uwaV08
V:154-462
Clan
:
no clan defined [family: RuBisCO_large_N]
(27)
Family
:
RuBisCO_large_N
(27)
Chlamydomonas reinhardtii (Chlamydomonas smithii)
(10)
2a
RuBisCO_large_N-1uwaV09
V:21-146
2b
RuBisCO_large_N-1uwaV10
V:21-146
2c
RuBisCO_large_N-1uwaV11
V:21-146
2d
RuBisCO_large_N-1uwaV12
V:21-146
2e
RuBisCO_large_N-1uwaV13
V:21-146
2f
RuBisCO_large_N-1uwaV14
V:21-146
2g
RuBisCO_large_N-1uwaV15
V:21-146
2h
RuBisCO_large_N-1uwaV16
V:21-146
Clan
:
no clan defined [family: RuBisCO_small]
(23)
Family
:
RuBisCO_small
(23)
Chlamydomonas reinhardtii (Chlamydomonas smithii)
(10)
3a
RuBisCO_small-1uwaW01
W:11-127
3b
RuBisCO_small-1uwaW02
W:11-127
3c
RuBisCO_small-1uwaW03
W:11-127
3d
RuBisCO_small-1uwaW04
W:11-127
3e
RuBisCO_small-1uwaW05
W:11-127
3f
RuBisCO_small-1uwaW06
W:11-127
3g
RuBisCO_small-1uwaW07
W:11-127
3h
RuBisCO_small-1uwaW08
W:11-127
[
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