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1UW5
Asym. Unit
Info
Asym.Unit (183 KB)
Biol.Unit 1 (47 KB)
Biol.Unit 2 (47 KB)
Biol.Unit 3 (47 KB)
Biol.Unit 4 (46 KB)
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(1)
Title
:
STRUCTURE OF PITP-ALPHA COMPLEXED TO PHOSPHATIDYLINOSITOL
Authors
:
S. J. Tilley, A. Skippen, J. Murray-Rust, S. Cockcroft, N. Q. Mcdonald
Date
:
30 Jan 04 (Deposition) - 04 Mar 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Transfer Protein, Lipid-Binding, Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. J. Tilley, A. Skippen, J. Murray-Rust, P. M. Swigart, A. Stewart, C. P. Morgan, S. Cockcroft, N. Q. Mcdonald
Structure-Function Analysis Of Human [Corrected] Phosphatidylinositol Transfer Protein Alpha Bound To Phosphatidylinositol.
Structure V. 12 317 2004
[
close entry info
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Hetero Components
(2, 36)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
2a: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINO... (PIEa)
2b: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINO... (PIEb)
2c: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINO... (PIEc)
2d: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINO... (PIEd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
32
Mod. Amino Acid
SELENOMETHIONINE
2
PIE
4
Ligand/Ion
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
[
close Hetero Component info
]
Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:22 , VAL A:26 , THR A:58 , LYS A:60 , TYR A:62 , ILE A:83 , GLU A:85 , ASN A:89 , CYS A:94 , THR A:96 , ILE A:98 , ILE A:111 , LYS A:194 , GLU A:217 , LEU A:220 , PHE A:224
BINDING SITE FOR RESIDUE PIE A1270
2
AC2
SOFTWARE
GLN B:22 , VAL B:26 , GLU B:33 , THR B:58 , LYS B:60 , TYR B:62 , GLU B:85 , ASN B:89 , CYS B:94 , THR B:96 , ILE B:98 , LYS B:194 , GLU B:217 , LEU B:220 , PHE B:224
BINDING SITE FOR RESIDUE PIE B1270
3
AC3
SOFTWARE
GLN C:22 , THR C:58 , LYS C:60 , ILE C:83 , GLU C:85 , ASN C:89 , CYS C:94 , THR C:96 , ILE C:98 , ILE C:111 , LYS C:194 , GLU C:217 , LEU C:220 , PHE C:224
BINDING SITE FOR RESIDUE PIE C1270
4
AC4
SOFTWARE
GLU D:33 , THR D:58 , LYS D:60 , TYR D:62 , GLU D:85 , ASN D:89 , CYS D:94 , THR D:96 , ILE D:111 , LYS D:194 , GLU D:217 , LEU D:220 , PHE D:221 , PHE D:224
BINDING SITE FOR RESIDUE PIE D1270
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
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]
Exons
(11, 44)
Info
All Exons
Exon 1.1 (A:1-7 | B:1-7 | C:1-7 | D:1-7)
Exon 1.2 (A:7-17 | B:7-17 | C:7-17 | D:7-17)
Exon 1.3 (A:18-66 | B:18-66 | C:18-66 | D:18...)
Exon 1.4 (A:66-97 | B:66-97 | C:66-97 | D:66...)
Exon 1.5 (A:97-99 | B:97-99 | C:97-99 | D:97...)
Exon 1.6 (A:100-124 | B:100-124 | C:100-124 ...)
Exon 1.7 (A:125-152 | B:125-152 | C:125-152 ...)
Exon 1.8 (A:153-178 | B:153-178 | C:153-178 ...)
Exon 1.9 (A:179-215 | B:179-215 | C:179-215 ...)
Exon 1.10 (A:216-256 | B:216-256 | C:216-256 ...)
Exon 1.11 (A:257-269 | B:257-269 | C:257-269 ...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9
10: Boundary 1.9/1.10
11: Boundary 1.10/1.11
12: Boundary 1.11/1.12
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000313486
1
ENSE00001198868
chr17:
1466110-1465835
276
PIPNA_HUMAN
1-7
7
4
A:1-7
B:1-7
C:1-7
D:1-7
7
7
7
7
1.2
ENST00000313486
2
ENSE00001198881
chr17:
1461853-1461823
31
PIPNA_HUMAN
7-17
11
4
A:7-17
B:7-17
C:7-17
D:7-17
11
11
11
11
1.3
ENST00000313486
3
ENSE00001198863
chr17:
1456443-1456298
146
PIPNA_HUMAN
18-66
49
4
A:18-66
B:18-66
C:18-66
D:18-66
49
49
49
49
1.4
ENST00000313486
4
ENSE00001198860
chr17:
1451681-1451590
92
PIPNA_HUMAN
66-97
32
4
A:66-97
B:66-97
C:66-97
D:66-97
32
32
32
32
1.5
ENST00000313486
5
ENSE00001656297
chr17:
1446321-1446314
8
PIPNA_HUMAN
97-99
3
4
A:97-99
B:97-99
C:97-99
D:97-99
3
3
3
3
1.6
ENST00000313486
6
ENSE00001198856
chr17:
1444934-1444860
75
PIPNA_HUMAN
100-124
25
4
A:100-124
B:100-124
C:100-124
D:100-124
25
25
25
25
1.7
ENST00000313486
7
ENSE00001198849
chr17:
1442246-1442163
84
PIPNA_HUMAN
125-152
28
4
A:125-152
B:125-152
C:125-152
D:125-152
28
28
28
28
1.8
ENST00000313486
8
ENSE00001198843
chr17:
1438812-1438735
78
PIPNA_HUMAN
153-178
26
4
A:153-178
B:153-178
C:153-178
D:153-178
26
26
26
26
1.9
ENST00000313486
9
ENSE00001198837
chr17:
1438586-1438476
111
PIPNA_HUMAN
179-215
37
4
A:179-215
B:179-215
C:179-215
D:179-215
37
37
37
37
1.10
ENST00000313486
10
ENSE00001198874
chr17:
1437515-1437393
123
PIPNA_HUMAN
216-256
41
4
A:216-256
B:216-256
C:216-256
D:216-256
41
41
41
41
1.11
ENST00000313486
11
ENSE00001198831
chr17:
1424939-1424873
67
PIPNA_HUMAN
257-270
14
4
A:257-269
B:257-269
C:257-269
D:257-268
13
13
13
12
1.12
ENST00000313486
12
ENSE00001212722
chr17:
1423832-1421287
2546
PIPNA_HUMAN
-
0
0
-
-
[
close EXON info
]
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1uw5a_ (A:)
1b: SCOP_d1uw5b_ (B:)
1c: SCOP_d1uw5c_ (C:)
1d: SCOP_d1uw5d_ (D:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TBP-like
(289)
Superfamily
:
Bet v1-like
(158)
Family
:
Phoshatidylinositol transfer protein, PITP
(4)
Protein domain
:
Phoshatidylinositol transfer protein, PITP
(4)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1uw5a_
A:
1b
d1uw5b_
B:
1c
d1uw5c_
C:
1d
d1uw5d_
D:
[
close SCOP info
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1uw5D00 (D:2-268)
1b: CATH_1uw5B00 (B:2-269)
1c: CATH_1uw5C00 (C:2-269)
1d: CATH_1uw5A00 (A:2-269)
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(
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(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4
(47)
Homologous Superfamily
:
[code=3.30.530.20, no name defined]
(47)
Human (Homo sapiens)
(6)
1a
1uw5D00
D:2-268
1b
1uw5B00
B:2-269
1c
1uw5C00
C:2-269
1d
1uw5A00
A:2-269
[
close CATH info
]
Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_IP_trans_1uw5D01 (D:2-254)
1b: PFAM_IP_trans_1uw5D02 (D:2-254)
1c: PFAM_IP_trans_1uw5D03 (D:2-254)
1d: PFAM_IP_trans_1uw5D04 (D:2-254)
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)
Clan
:
Bet_V_1_like
(93)
Family
:
IP_trans
(3)
Homo sapiens (Human)
(1)
1a
IP_trans-1uw5D01
D:2-254
1b
IP_trans-1uw5D02
D:2-254
1c
IP_trans-1uw5D03
D:2-254
1d
IP_trans-1uw5D04
D:2-254
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