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1UM7
Asym. Unit
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Asym.Unit (546 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE THIRD PDZ DOMAIN OF SYNAPSE-ASSOCIATED PROTEIN 102
Authors
:
X. -R. Qin, T. Nagashima, F. Hayashi, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
24 Sep 03 (Deposition) - 24 Mar 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Pdz, Discs Large Homolog 3, Dlg3-Human Presynaptic Protein, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Genomics, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. -R. Qin, T. Nagashima, F. Hayashi, S. Yokoyama
Solution Structure Of The Third Pdz Domain Of Synapse-Associated Protein 102
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|-|A:18-99)
2: SH3 (A:110-113)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
DLG3_HUMAN
131-218
226-313
386-467
1
-
-
A:18-99
2
SH3
PS50002
Src homology 3 (SH3) domain profile.
DLG3_HUMAN
501-571
1
A:110-113
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Exons
(7, 7)
Info
All Exons
Exon 1.6a (A:1-8)
Exon 1.6c (A:9-10)
Exon 1.7 (A:11-14 (gaps))
Exon 1.9 (A:14-66)
Exon 1.10 (A:67-101)
Exon 1.13b (A:101-109 (gaps))
Exon 1.14b (A:110-113)
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All Exon Boundaries
1: Boundary 1.5/1.6a
2: Boundary 1.6a/1.6c
3: Boundary 1.6c/1.7
4: Boundary 1.7/1.9
5: Boundary 1.9/1.10
6: Boundary 1.10/1.13b
7: Boundary 1.13b/1.14b
8: Boundary 1.14b/1.15
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000374360
1b
ENSE00001958108
X:69664819-69665408
590
DLG3_HUMAN
1-119
119
0
-
-
1.3
ENST00000374360
3
ENSE00000672255
X:69668763-69668813
51
DLG3_HUMAN
120-136
17
0
-
-
1.4
ENST00000374360
4
ENSE00000672253
X:69669209-69669333
125
DLG3_HUMAN
137-178
42
0
-
-
1.5
ENST00000374360
5
ENSE00000672252
X:69669540-69669709
170
DLG3_HUMAN
178-235
58
0
-
-
1.6a
ENST00000374360
6a
ENSE00000436378
X:69670019-69670155
137
DLG3_HUMAN
235-280
46
1
A:1-8
8
1.6c
ENST00000374360
6c
ENSE00000672250
X:69670489-69670633
145
DLG3_HUMAN
281-329
49
1
A:9-10
2
1.7
ENST00000374360
7
ENSE00000672249
X:69671717-69671876
160
DLG3_HUMAN
329-382
54
1
A:11-14 (gaps)
49
1.9
ENST00000374360
9
ENSE00001599030
X:69673487-69673643
157
DLG3_HUMAN
382-434
53
1
A:14-66
53
1.10
ENST00000374360
10
ENSE00000672247
X:69674064-69674166
103
DLG3_HUMAN
435-469
35
1
A:67-101
35
1.13b
ENST00000374360
13b
ENSE00001675478
X:69699000-69699114
115
DLG3_HUMAN
469-507
39
1
A:101-109 (gaps)
24
1.14b
ENST00000374360
14b
ENSE00000672235
X:69711957-69712133
177
DLG3_HUMAN
507-566
60
1
A:110-113
4
1.15
ENST00000374360
15
ENSE00000436409
X:69712371-69712446
76
DLG3_HUMAN
566-591
26
0
-
-
1.17
ENST00000374360
17
ENSE00000815626
X:69715258-69715303
46
DLG3_HUMAN
592-607
16
0
-
-
1.19b
ENST00000374360
19b
ENSE00000672149
X:69718370-69718420
51
DLG3_HUMAN
607-624
18
0
-
-
1.20
ENST00000374360
20
ENSE00001705646
X:69719026-69719127
102
DLG3_HUMAN
624-658
35
0
-
-
1.21b
ENST00000374360
21b
ENSE00000672147
X:69719727-69719899
173
DLG3_HUMAN
658-715
58
0
-
-
1.22a
ENST00000374360
22a
ENSE00000672146
X:69720321-69720430
110
DLG3_HUMAN
716-752
37
0
-
-
1.22c
ENST00000374360
22c
ENSE00000436391
X:69720748-69720839
92
DLG3_HUMAN
752-783
32
0
-
-
1.23c
ENST00000374360
23c
ENSE00001154826
X:69722013-69725337
3325
DLG3_HUMAN
783-817
35
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1um7a_ (A:)
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Class
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All beta proteins
(24004)
Fold
:
PDZ domain-like
(299)
Superfamily
:
PDZ domain-like
(299)
Family
:
PDZ domain
(180)
Protein domain
:
Synapse-associated protein 102
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1um7a_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1um7A00 (A:1-113)
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Class
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Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
Pdz3 Domain
(191)
Homologous Superfamily
:
[code=2.30.42.10, no name defined]
(191)
Human (Homo sapiens)
(120)
1a
1um7A00
A:1-113
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_PDZ_1um7A01 (A:18-96)
2a: PFAM_PDZ_assoc_1um7A02 (A:14-17)
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Clan
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PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-1um7A01
A:18-96
Clan
:
no clan defined [family: PDZ_assoc]
(8)
Family
:
PDZ_assoc
(8)
Homo sapiens (Human)
(3)
2a
PDZ_assoc-1um7A02
A:14-17
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Chain A
Asymmetric Unit 1
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