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1UM0
Asym. Unit
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Asym.Unit (246 KB)
Biol.Unit 1 (239 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CHORISMATE SYNTHASE COMPLEXED WITH FMN
Authors
:
H. J. Ahn, H. J. Yoon, B. Lee, S. W. Suh
Date
:
18 Sep 03 (Deposition) - 01 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Beta-Alpha-Beta Sandwich Fold, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. J. Ahn, H. J. Yoon, B. Lee, S. W. Suh
Crystal Structure Of Chorismate Synthase: A Novel Fmn-Binding Protein Fold And Functional Insights
J. Mol. Biol. V. 336 903 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: FLAVIN MONONUCLEOTIDE (FMNa)
1b: FLAVIN MONONUCLEOTIDE (FMNb)
1c: FLAVIN MONONUCLEOTIDE (FMNc)
1d: FLAVIN MONONUCLEOTIDE (FMNd)
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No.
Name
Count
Type
Full Name
1
FMN
4
Ligand/Ion
FLAVIN MONONUCLEOTIDE
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:103 , HIS A:104 , ARG A:123 , SER A:125 , LEU A:240 , ASN A:241 , GLY A:242 , LYS A:296 , THR A:298 , PRO A:299 , SER A:300 , ILE A:327 , ARG A:330 , HOH A:1420 , HOH A:1432 , HOH A:1436 , HOH A:1529 , LEU D:280 , GLY D:281
BINDING SITE FOR RESIDUE FMN A 1400
2
AC2
SOFTWARE
SER B:103 , HIS B:104 , ARG B:123 , SER B:125 , LEU B:240 , ASN B:241 , LYS B:296 , THR B:298 , PRO B:299 , SER B:300 , ILE B:327 , ARG B:330 , HOH B:2411 , HOH B:2434 , HOH B:2458 , HOH B:2460 , HOH B:2481 , LEU C:280 , GLY C:281 , GLY C:282
BINDING SITE FOR RESIDUE FMN B 2400
3
AC3
SOFTWARE
LEU B:280 , GLY B:281 , ARG C:50 , SER C:103 , HIS C:104 , ARG C:123 , SER C:125 , LEU C:240 , ASN C:241 , GLY C:242 , LYS C:296 , THR C:298 , PRO C:299 , SER C:300 , ILE C:327 , HOH C:3419
BINDING SITE FOR RESIDUE FMN C 3400
4
AC4
SOFTWARE
LEU A:280 , GLY A:281 , SER D:103 , HIS D:104 , ARG D:123 , SER D:125 , LEU D:240 , ASN D:241 , GLY D:242 , LYS D:296 , THR D:298 , PRO D:299 , SER D:300 , ILE D:327 , ARG D:330 , HOH D:4414 , HOH D:4433 , HOH D:4476 , HOH D:4514
BINDING SITE FOR RESIDUE FMN D 4400
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 12)
Info
All PROSITE Patterns/Profiles
1: CHORISMATE_SYNTHASE_1 (A:14-29,B:14-29,C:14-29,D:14-29)
2: CHORISMATE_SYNTHASE_2 (A:122-138,B:122-138,C:122-138,D:12...)
3: CHORISMATE_SYNTHASE_3 (A:322-338,B:322-338,C:322-338,D:32...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHORISMATE_SYNTHASE_1
PS00787
Chorismate synthase signature 1.
AROC_HELPY
14-29
4
A:14-29
B:14-29
C:14-29
D:14-29
2
CHORISMATE_SYNTHASE_2
PS00788
Chorismate synthase signature 2.
AROC_HELPY
122-138
4
A:122-138
B:122-138
C:122-138
D:122-138
3
CHORISMATE_SYNTHASE_3
PS00789
Chorismate synthase signature 3.
AROC_HELPY
322-338
4
A:322-338
B:322-338
C:322-338
D:322-338
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1um0a_ (A:)
1b: SCOP_d1um0b_ (B:)
1c: SCOP_d1um0c_ (C:)
1d: SCOP_d1um0d_ (D:)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Chorismate synthase, AroC
(18)
Superfamily
:
Chorismate synthase, AroC
(18)
Family
:
Chorismate synthase, AroC
(14)
Protein domain
:
Chorismate synthase, AroC
(11)
Helicobacter pylori [TaxId: 210]
(2)
1a
d1um0a_
A:
1b
d1um0b_
B:
1c
d1um0c_
C:
1d
d1um0d_
D:
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CATH Domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Chorismate_synt_1um0D01 (D:8-349)
1b: PFAM_Chorismate_synt_1um0D02 (D:8-349)
1c: PFAM_Chorismate_synt_1um0D03 (D:8-349)
1d: PFAM_Chorismate_synt_1um0D04 (D:8-349)
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Clan
:
no clan defined [family: Chorismate_synt]
(9)
Family
:
Chorismate_synt
(9)
Helicobacter pylori (Campylobacter pylori)
(2)
1a
Chorismate_synt-1um0D01
D:8-349
1b
Chorismate_synt-1um0D02
D:8-349
1c
Chorismate_synt-1um0D03
D:8-349
1d
Chorismate_synt-1um0D04
D:8-349
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