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1ULQ
Asym. Unit
Info
Asym.Unit (479 KB)
Biol.Unit 1 (241 KB)
Biol.Unit 2 (241 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TT0182 FROM THERMUS THERMOPHILUS HB8
Authors
:
H. Ago, K. Hamada, K. Ida, H. Kanda, M. Sugahara, M. Yamamoto, C. Kuroishi, S. Kuramitsu, S. Yokoyama, M. Miyano, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
16 Sep 03 (Deposition) - 02 Nov 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Transferase, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Ago, K. Hamada, K. Ida, H. Kanda, M. Sugahara, M. Yamamoto, C. Kuroishi, S. Kuramitsu, S. Yokoyama, M. Miyano
Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 16)
Info
All SCOP Domains
1a: SCOP_d1ulqa1 (A:3-275)
1b: SCOP_d1ulqa2 (A:276-400)
1c: SCOP_d1ulqf1 (F:3-275)
1d: SCOP_d1ulqf2 (F:276-400)
1e: SCOP_d1ulqg1 (G:2-275)
1f: SCOP_d1ulqg2 (G:276-400)
1g: SCOP_d1ulqh1 (H:2-275)
1h: SCOP_d1ulqh2 (H:276-400)
1i: SCOP_d1ulqb1 (B:3-275)
1j: SCOP_d1ulqb2 (B:276-400)
1k: SCOP_d1ulqc1 (C:2-275)
1l: SCOP_d1ulqc2 (C:276-400)
1m: SCOP_d1ulqd1 (D:2-275)
1n: SCOP_d1ulqd2 (D:276-400)
1o: SCOP_d1ulqe1 (E:2-275)
1p: SCOP_d1ulqe2 (E:276-400)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
Thiolase-related
(67)
Protein domain
:
Beta-ketoadipyl CoA thiolase
(1)
Thermus thermophilus [TaxId: 274]
(1)
1a
d1ulqa1
A:3-275
1b
d1ulqa2
A:276-400
1c
d1ulqf1
F:3-275
1d
d1ulqf2
F:276-400
1e
d1ulqg1
G:2-275
1f
d1ulqg2
G:276-400
1g
d1ulqh1
H:2-275
1h
d1ulqh2
H:276-400
1i
d1ulqb1
B:3-275
1j
d1ulqb2
B:276-400
1k
d1ulqc1
C:2-275
1l
d1ulqc2
C:276-400
1m
d1ulqd1
D:2-275
1n
d1ulqd2
D:276-400
1o
d1ulqe1
E:2-275
1p
d1ulqe2
E:276-400
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CATH Domains
(1, 16)
Info
all CATH domains
1a: CATH_1ulqA02 (A:141-199,A:282-400)
1b: CATH_1ulqB02 (B:141-199,B:282-400)
1c: CATH_1ulqF01 (F:3-126,F:200-281)
1d: CATH_1ulqC01 (C:2-126,C:200-281)
1e: CATH_1ulqD01 (D:2-126,D:200-281)
1f: CATH_1ulqE01 (E:2-126,E:200-281)
1g: CATH_1ulqG01 (G:2-126,G:200-281)
1h: CATH_1ulqH01 (H:2-126,H:200-281)
1i: CATH_1ulqC02 (C:141-199,C:282-400)
1j: CATH_1ulqD02 (D:141-199,D:282-400)
1k: CATH_1ulqE02 (E:141-199,E:282-400)
1l: CATH_1ulqF02 (F:141-199,F:282-400)
1m: CATH_1ulqG02 (G:141-199,G:282-400)
1n: CATH_1ulqH02 (H:141-199,H:282-400)
1o: CATH_1ulqA01 (A:3-126,A:200-281)
1p: CATH_1ulqB01 (B:3-126,B:200-281)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Peroxisomal Thiolase; Chain A, domain 1
(130)
Homologous Superfamily
:
[code=3.40.47.10, no name defined]
(130)
Thermus thermophilus. Organism_taxid: 274.
(1)
1a
1ulqA02
A:141-199,A:282-400
1b
1ulqB02
B:141-199,B:282-400
1c
1ulqF01
F:3-126,F:200-281
1d
1ulqC01
C:2-126,C:200-281
1e
1ulqD01
D:2-126,D:200-281
1f
1ulqE01
E:2-126,E:200-281
1g
1ulqG01
G:2-126,G:200-281
1h
1ulqH01
H:2-126,H:200-281
1i
1ulqC02
C:141-199,C:282-400
1j
1ulqD02
D:141-199,D:282-400
1k
1ulqE02
E:141-199,E:282-400
1l
1ulqF02
F:141-199,F:282-400
1m
1ulqG02
G:141-199,G:282-400
1n
1ulqH02
H:141-199,H:282-400
1o
1ulqA01
A:3-126,A:200-281
1p
1ulqB01
B:3-126,B:200-281
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Pfam Domains
(2, 16)
Info
all PFAM domains
1a: PFAM_Thiolase_C_1ulqH01 (H:275-399)
1b: PFAM_Thiolase_C_1ulqH02 (H:275-399)
1c: PFAM_Thiolase_C_1ulqH03 (H:275-399)
1d: PFAM_Thiolase_C_1ulqH04 (H:275-399)
1e: PFAM_Thiolase_C_1ulqH05 (H:275-399)
1f: PFAM_Thiolase_C_1ulqH06 (H:275-399)
1g: PFAM_Thiolase_C_1ulqH07 (H:275-399)
1h: PFAM_Thiolase_C_1ulqH08 (H:275-399)
2a: PFAM_Thiolase_N_1ulqH09 (H:2-268)
2b: PFAM_Thiolase_N_1ulqH10 (H:2-268)
2c: PFAM_Thiolase_N_1ulqH11 (H:2-268)
2d: PFAM_Thiolase_N_1ulqH12 (H:2-268)
2e: PFAM_Thiolase_N_1ulqH13 (H:2-268)
2f: PFAM_Thiolase_N_1ulqH14 (H:2-268)
2g: PFAM_Thiolase_N_1ulqH15 (H:2-268)
2h: PFAM_Thiolase_N_1ulqH16 (H:2-268)
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Clan
:
Thiolase
(72)
Family
:
Thiolase_C
(23)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
1a
Thiolase_C-1ulqH01
H:275-399
1b
Thiolase_C-1ulqH02
H:275-399
1c
Thiolase_C-1ulqH03
H:275-399
1d
Thiolase_C-1ulqH04
H:275-399
1e
Thiolase_C-1ulqH05
H:275-399
1f
Thiolase_C-1ulqH06
H:275-399
1g
Thiolase_C-1ulqH07
H:275-399
1h
Thiolase_C-1ulqH08
H:275-399
Family
:
Thiolase_N
(23)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(1)
2a
Thiolase_N-1ulqH09
H:2-268
2b
Thiolase_N-1ulqH10
H:2-268
2c
Thiolase_N-1ulqH11
H:2-268
2d
Thiolase_N-1ulqH12
H:2-268
2e
Thiolase_N-1ulqH13
H:2-268
2f
Thiolase_N-1ulqH14
H:2-268
2g
Thiolase_N-1ulqH15
H:2-268
2h
Thiolase_N-1ulqH16
H:2-268
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Asym.Unit (479 KB)
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Header - Biol.Unit 1
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