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1UG3
Asym. Unit
Info
Asym.Unit (112 KB)
Biol.Unit 1 (56 KB)
Biol.Unit 2 (56 KB)
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(1)
Title
:
C-TERMINAL PORTION OF HUMAN EIF4GI
Authors
:
L. Bellsolell, P. F. Cho-Park, F. Poulin, N. Sonenberg, S. K. Burley
Date
:
11 Jun 03 (Deposition) - 22 Mar 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.24
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Eif4G, Heat Repeat, Translation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Bellsolell, P. F. Cho-Park, F. Poulin, N. Sonenberg, S. K. Burley
Two Structurally Atypical Heat Domains In The C-Terminal Portion Of Human Eif4G Support Binding To Eif4A And Mnk1
Structure V. 14 913 2006
(for further references see the
PDB file header
)
[
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
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]
SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_055705 (S1234P, chain A/B, )
2: VAR_066580 (N1258S, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_055705
L
1233
P
IF4G1_HUMAN
Polymorphism
2230570
A/B
S
1234
P
2
UniProt
VAR_066580
N
1257
S
IF4G1_HUMAN
Polymorphism
73053766
A/B
N
1258
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: MI (A:1242-1364,B:1242-1364)
2: W2 (A:1438-1566,B:1438-1566)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MI
PS51366
MI domain profile.
IF4G1_HUMAN
1241-1363
2
A:1242-1364
B:1242-1364
2
W2
PS51363
W2 domain profile.
IF4G1_HUMAN
1433-1599
2
A:1438-1566
B:1438-1566
[
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]
Exons
(9, 18)
Info
All Exons
Exon 1.24a (A:1234-1261 | B:1234-1261)
Exon 1.24d (A:1262-1319 | B:1262-1319)
Exon 1.25c (A:1319-1361 | B:1319-1361)
Exon 1.25e (A:1361-1388 | B:1361-1388)
Exon 1.26a (A:1389-1421 | B:1389-1421)
Exon 1.26d (A:1422-1466 (gaps) | B:1422-1466 (...)
Exon 1.27b (A:1467-1494 | B:1467-1494)
Exon 1.27e (A:1494-1541 | B:1494-1541)
Exon 1.28g (A:1541-1566 | B:1541-1566)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.23b/1.24a
02: Boundary 1.24a/1.24d
03: Boundary 1.24d/1.25c
04: Boundary 1.25c/1.25e
05: Boundary 1.25e/1.26a
06: Boundary 1.26a/1.26d
07: Boundary 1.26d/1.27b
08: Boundary 1.27b/1.27e
09: Boundary 1.27e/1.28g
10: Boundary 1.28g/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000346169
1a
ENSE00001957337
chr3:
184032283-184032462
180
IF4G1_HUMAN
-
0
0
-
-
1.2e
ENST00000346169
2e
ENSE00001364164
chr3:
184033277-184033333
57
IF4G1_HUMAN
-
0
0
-
-
1.2f
ENST00000346169
2f
ENSE00002150918
chr3:
184033551-184033644
94
IF4G1_HUMAN
1-20
20
0
-
-
1.2i
ENST00000346169
2i
ENSE00001640019
chr3:
184033920-184034006
87
IF4G1_HUMAN
21-49
29
0
-
-
1.4b
ENST00000346169
4b
ENSE00001660690
chr3:
184035109-184035285
177
IF4G1_HUMAN
50-108
59
0
-
-
1.5b
ENST00000346169
5b
ENSE00001754377
chr3:
184035505-184035604
100
IF4G1_HUMAN
109-142
34
0
-
-
1.7c
ENST00000346169
7c
ENSE00002187218
chr3:
184037477-184037589
113
IF4G1_HUMAN
142-179
38
0
-
-
1.8f
ENST00000346169
8f
ENSE00002192598
chr3:
184038418-184038510
93
IF4G1_HUMAN
180-210
31
0
-
-
1.9b
ENST00000346169
9b
ENSE00001731325
chr3:
184038715-184038781
67
IF4G1_HUMAN
211-233
23
0
-
-
1.10g
ENST00000346169
10g
ENSE00001669160
chr3:
184039070-184039891
822
IF4G1_HUMAN
233-507
275
0
-
-
1.11
ENST00000346169
11
ENSE00001609185
chr3:
184040150-184040238
89
IF4G1_HUMAN
507-536
30
0
-
-
1.12
ENST00000346169
12
ENSE00001719210
chr3:
184040332-184040518
187
IF4G1_HUMAN
537-599
63
0
-
-
1.13
ENST00000346169
13
ENSE00001656080
chr3:
184040609-184040742
134
IF4G1_HUMAN
599-643
45
0
-
-
1.14
ENST00000346169
14
ENSE00001783634
chr3:
184040871-184041029
159
IF4G1_HUMAN
644-696
53
0
-
-
1.15b
ENST00000346169
15b
ENSE00001615721
chr3:
184041196-184041381
186
IF4G1_HUMAN
697-758
62
0
-
-
1.16
ENST00000346169
16
ENSE00001678763
chr3:
184041568-184041765
198
IF4G1_HUMAN
759-824
66
0
-
-
1.17c
ENST00000346169
17c
ENSE00001769552
chr3:
184041989-184042135
147
IF4G1_HUMAN
825-873
49
0
-
-
1.18b
ENST00000346169
18b
ENSE00001788274
chr3:
184042666-184042902
237
IF4G1_HUMAN
874-952
79
0
-
-
1.19b
ENST00000346169
19b
ENSE00001705319
chr3:
184043057-184043161
105
IF4G1_HUMAN
953-987
35
0
-
-
1.19d
ENST00000346169
19d
ENSE00001595277
chr3:
184043268-184043427
160
IF4G1_HUMAN
988-1041
54
0
-
-
1.20a
ENST00000346169
20a
ENSE00001651286
chr3:
184043639-184043739
101
IF4G1_HUMAN
1041-1074
34
0
-
-
1.21
ENST00000346169
21
ENSE00001632341
chr3:
184044315-184044417
103
IF4G1_HUMAN
1075-1109
35
0
-
-
1.22b
ENST00000346169
22b
ENSE00001746928
chr3:
184044669-184044771
103
IF4G1_HUMAN
1109-1143
35
0
-
-
1.23b
ENST00000346169
23b
ENSE00001711150
chr3:
184045004-184045236
233
IF4G1_HUMAN
1143-1221
79
0
-
-
1.24a
ENST00000346169
24a
ENSE00001672897
chr3:
184045374-184045492
119
IF4G1_HUMAN
1221-1260
40
2
A:1234-1261
B:1234-1261
28
28
1.24d
ENST00000346169
24d
ENSE00001757656
chr3:
184045618-184045790
173
IF4G1_HUMAN
1261-1318
58
2
A:1262-1319
B:1262-1319
58
58
1.25c
ENST00000346169
25c
ENSE00001596715
chr3:
184046419-184046544
126
IF4G1_HUMAN
1318-1360
43
2
A:1319-1361
B:1319-1361
43
43
1.25e
ENST00000346169
25e
ENSE00001717841
chr3:
184046697-184046778
82
IF4G1_HUMAN
1360-1387
28
2
A:1361-1388
B:1361-1388
28
28
1.26a
ENST00000346169
26a
ENSE00001597508
chr3:
184049054-184049152
99
IF4G1_HUMAN
1388-1420
33
2
A:1389-1421
B:1389-1421
33
33
1.26d
ENST00000346169
26d
ENSE00001690366
chr3:
184049260-184049394
135
IF4G1_HUMAN
1421-1465
45
2
A:1422-1466 (gaps)
B:1422-1466 (gaps)
45
45
1.27b
ENST00000346169
27b
ENSE00001666158
chr3:
184049516-184049597
82
IF4G1_HUMAN
1466-1493
28
2
A:1467-1494
B:1467-1494
28
28
1.27e
ENST00000346169
27e
ENSE00001690919
chr3:
184049734-184049874
141
IF4G1_HUMAN
1493-1540
48
2
A:1494-1541
B:1494-1541
48
48
1.28g
ENST00000346169
28g
ENSE00001687057
chr3:
184052515-184053141
627
IF4G1_HUMAN
1540-1599
60
2
A:1541-1566
B:1541-1566
26
26
[
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]
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d1ug3a1 (A:1235-1427)
1b: SCOP_d1ug3a2 (A:1438-1564)
1c: SCOP_d1ug3b1 (B:1234-1427)
1d: SCOP_d1ug3b2 (B:1438-1566)
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Protein Domains
(
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(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ARM repeat
(317)
Family
:
MIF4G domain-like
(17)
Protein domain
:
Eukaryotic initiation factor eIF4G
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1ug3a1
A:1235-1427
1b
d1ug3a2
A:1438-1564
1c
d1ug3b1
B:1234-1427
1d
d1ug3b2
B:1438-1566
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_MA3_1ug3B01 (B:1243-1355)
1b: PFAM_MA3_1ug3B02 (B:1243-1355)
2a: PFAM_W2_1ug3B03 (B:1519-1566)
2b: PFAM_W2_1ug3B04 (B:1519-1566)
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Clans
(
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(
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Families
(
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(
)
Organisms
(
)
(
)
Clan
:
TPR
(230)
Family
:
MA3
(5)
Homo sapiens (Human)
(5)
1a
MA3-1ug3B01
B:1243-1355
1b
MA3-1ug3B02
B:1243-1355
Family
:
W2
(3)
Homo sapiens (Human)
(2)
2a
W2-1ug3B03
B:1519-1566
2b
W2-1ug3B04
B:1519-1566
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