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1UFG
Asym. Unit
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Asym.Unit (760 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF IMMUNOGLOBULIN LIKE DOMAIN OF MOUSE NUCLEAR LAMIN
Authors
:
N. Kobayashi, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
29 May 03 (Deposition) - 22 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (20 x)
Keywords
:
Immunoglobulin Like Fold, Nuclear Lamin, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. Kobayashi, T. Kigawa, S. Koshiba, M. Inoue, S. Yokoyama
Solution Structure Of Immunoglobulin Like Domain Of Mouse Nuclear Lamin
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(5, 5)
Info
All Exons
Exon 1.10 (A:1-60 (gaps))
Exon 1.11b (A:61-96)
Exon 1.12 (A:97-136)
Exon 1.13a (A:137-145)
Exon 1.14b (A:146-151 (gaps))
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All Exon Boundaries
1: Boundary 1.9/1.10
2: Boundary 1.10/1.11b
3: Boundary 1.11b/1.12
4: Boundary 1.12/1.13a
5: Boundary 1.13a/1.14b
6: Boundary 1.14b/1.15c
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3c
ENSMUST00000029699
3c
ENSMUSE00000721382
chr3:
88307257-88306670
588
LMNA_MOUSE
1-119
119
0
-
-
1.5
ENSMUST00000029699
5
ENSMUSE00000419377
chr3:
88292353-88292197
157
LMNA_MOUSE
119-171
53
0
-
-
1.6
ENSMUST00000029699
6
ENSMUSE00000175618
chr3:
88290855-88290730
126
LMNA_MOUSE
172-213
42
0
-
-
1.7
ENSMUST00000029699
7
ENSMUSE00000175619
chr3:
88290552-88290382
171
LMNA_MOUSE
214-270
57
0
-
-
1.8
ENSMUST00000029699
8
ENSMUSE00000175620
chr3:
88290251-88290126
126
LMNA_MOUSE
271-312
42
0
-
-
1.9
ENSMUST00000029699
9
ENSMUSE00000175616
chr3:
88289069-88288849
221
LMNA_MOUSE
313-386
74
0
-
-
1.10
ENSMUST00000029699
10
ENSMUSE00000175611
chr3:
88288759-88288537
223
LMNA_MOUSE
386-460
75
1
A:1-60 (gaps)
61
1.11b
ENSMUST00000029699
11b
ENSMUSE00000175613
chr3:
88288076-88287969
108
LMNA_MOUSE
461-496
36
1
A:61-96
36
1.12
ENSMUST00000029699
12
ENSMUSE00000175612
chr3:
88287868-88287749
120
LMNA_MOUSE
497-536
40
1
A:97-136
40
1.13a
ENSMUST00000029699
13a
ENSMUSE00000175621
chr3:
88287335-88287240
96
LMNA_MOUSE
537-568
32
1
A:137-145
9
1.14b
ENSMUST00000029699
14b
ENSMUSE00000500596
chr3:
88286534-88286268
267
LMNA_MOUSE
569-657
89
1
A:146-151 (gaps)
41
1.15c
ENSMUST00000029699
15c
ENSMUSE00000820828
chr3:
88286022-88285070
953
LMNA_MOUSE
658-665
8
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ufga_ (A:)
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Protein Domains
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(
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Organisms
(
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
Lamin A/C globular tail domain
(8)
Family
:
Lamin A/C globular tail domain
(4)
Protein domain
:
Lamin A/C globular tail domain
(3)
Mouse (Mus musculus) [TaxId: 10090]
(1)
1a
d1ufga_
A:
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_1ufgA00 (A:1-151)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.1260, no name defined]
(3)
House mouse (Mus musculus)
(1)
1a
1ufgA00
A:1-151
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_LTD_1ufgA01 (A:29-145)
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Clan
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no clan defined [family: LTD]
(3)
Family
:
LTD
(3)
Mus musculus (Mouse)
(1)
1a
LTD-1ufgA01
A:29-145
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Chain A
Asymmetric Unit 1
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