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1UCH
Asym. Unit
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Asym.Unit (40 KB)
Biol.Unit 1 (37 KB)
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(1)
Title
:
DEUBIQUITINATING ENZYME UCH-L3 (HUMAN) AT 1.8 ANGSTROM RESOLUTION
Authors
:
S. C. Johnston, C. N. Larsen, W. J. Cook, K. D. Wilkinson, C. P. Hill
Date
:
06 Oct 97 (Deposition) - 28 Jan 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Cysteine Protease, Deubiquitinating Enzyme, Ubiquitin, C- Terminal Hydrolase, Ubiquitin Conjugation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. C. Johnston, C. N. Larsen, W. J. Cook, K. D. Wilkinson, C. P. Hill
Crystal Structure Of A Deubiquitinating Enzyme (Human Uch-L3) At 1. 8 A Resolution.
Embo J. V. 16 3787 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(1, 1)
Info
All Sites
1: CAT (UNKNOWN)
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Label:
No.
Name
Evidence
Residues
Description
1
CAT
UNKNOWN
GLN A:89 , CYS A:95 , HIS A:169 , ASP A:184
ACTIVE SITE RESIDUES.
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SAPs(SNPs)/Variants
(0, 0)
Info
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: UCH_1 (A:89-105)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
UCH_1
PS00140
Ubiquitin carboxyl-terminal hydrolase family 1 cysteine active-site.
UCHL3_HUMAN
89-105
1
A:89-105
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Exons
(9, 9)
Info
All Exons
Exon 1.2 (A:5-14)
Exon 1.3 (A:15-18)
Exon 1.4 (A:19-61)
Exon 1.5a (A:62-114)
Exon 1.6 (A:114-142)
Exon 1.7 (A:143-146)
Exon 1.9 (A:167-184)
Exon 1.10 (A:184-203)
Exon 1.11b (A:204-230)
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All Exon Boundaries
01: Boundary -/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5a
05: Boundary 1.5a/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.9
08: Boundary 1.9/1.10
09: Boundary 1.10/1.11b
10: Boundary 1.11b/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000377595
2
ENSE00002160775
chr13:
76123927-76123998
72
UCHL3_HUMAN
1-14
14
1
A:5-14
10
1.3
ENST00000377595
3
ENSE00001785432
chr13:
76124112-76124123
12
UCHL3_HUMAN
15-18
4
1
A:15-18
4
1.4
ENST00000377595
4
ENSE00001596545
chr13:
76134889-76135017
129
UCHL3_HUMAN
19-61
43
1
A:19-61
43
1.5a
ENST00000377595
5a
ENSE00000684200
chr13:
76140831-76140987
157
UCHL3_HUMAN
62-114
53
1
A:62-114
53
1.6
ENST00000377595
6
ENSE00000684198
chr13:
76141363-76141448
86
UCHL3_HUMAN
114-142
29
1
A:114-142
29
1.7
ENST00000377595
7
ENSE00001349979
chr13:
76143596-76143643
48
UCHL3_HUMAN
143-158
16
1
A:143-146
4
1.9
ENST00000377595
9
ENSE00000684194
chr13:
76169051-76169126
76
UCHL3_HUMAN
159-184
26
1
A:167-184
18
1.10
ENST00000377595
10
ENSE00000684192
chr13:
76178905-76178963
59
UCHL3_HUMAN
184-203
20
1
A:184-203
20
1.11b
ENST00000377595
11b
ENSE00001853190
chr13:
76179865-76180069
205
UCHL3_HUMAN
204-230
27
1
A:204-230
27
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1ucha_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Cysteine proteinases
(392)
Superfamily
:
Cysteine proteinases
(392)
Family
:
Ubiquitin carboxyl-terminal hydrolase UCH-L
(10)
Protein domain
:
Ubiquitin carboxyl-terminal hydrolase UCH-l3
(3)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d1ucha_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1uchA00 (A:5-230)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Ubiquitin C-terminal Hydrolase UCH-l3
(8)
Homologous Superfamily
:
Ubiquitin C-terminal Hydrolase Uch-l3
(8)
Human (Homo sapiens)
(7)
1a
1uchA00
A:5-230
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Peptidase_C12_1uchA01 (A:5-216)
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Clan
:
Peptidase_CA
(169)
Family
:
Peptidase_C12
(5)
Homo sapiens (Human)
(3)
1a
Peptidase_C12-1uchA01
A:5-216
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