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1UC2
Asym. Unit
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Asym.Unit (176 KB)
Biol.Unit 1 (171 KB)
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(1)
Title
:
HYPOTHETICAL EXTEIN PROTEIN OF PH1602 FROM PYROCOCCUS HORIKOSHII
Authors
:
C. Okada, Y. Maegawa, M. Yao, I. Tanaka
Date
:
08 Apr 03 (Deposition) - 04 May 04 (Release) - 14 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Structural Genomics, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Okada, Y. Maegawa, M. Yao, I. Tanaka
Crystal Structure Of An Rtcb Homolog Protein (Ph1602-Extein Protein) From Pyrococcus Horikoshii Reveals A Novel Fold
Proteins V. 63 1119 2006
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Hetero Components
(2, 11)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
1i: SULFATE ION (SO4i)
2a: SUCROSE (SUCa)
2b: SUCROSE (SUCb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
SO4
9
Ligand/Ion
SULFATE ION
2
SUC
2
Ligand/Ion
SUCROSE
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:17 , ARG A:23 , PRO A:25 , TYR A:57 , LYS A:58 , ASP A:340 , HOH A:2351 , HOH A:2748 , HOH A:2799 , HOH A:2817 , HOH A:2818
BINDING SITE FOR RESIDUE SUC A 1001
02
AC2
SOFTWARE
LYS B:17 , ARG B:23 , PRO B:25 , TYR B:57 , LYS B:58 , VAL B:339 , ASP B:340 , HOH B:2574 , HOH B:2672 , HOH B:2800 , HOH B:2807
BINDING SITE FOR RESIDUE SUC B 1002
03
AC3
SOFTWARE
TYR A:70 , GLY A:93 , TYR A:94 , LYS A:351 , HOH A:2641 , HOH A:2680
BINDING SITE FOR RESIDUE SO4 A 1101
04
AC4
SOFTWARE
ASP A:95 , GLY A:199 , SER A:200 , HIS A:203 , ARG A:238 , HOH A:2067 , HOH A:2374
BINDING SITE FOR RESIDUE SO4 A 1102
05
AC5
SOFTWARE
ARG A:366 , ARG A:369
BINDING SITE FOR RESIDUE SO4 A 1103
06
AC6
SOFTWARE
ASP B:95 , SER B:200 , HIS B:203 , ARG B:238 , HOH B:2050 , HOH B:2424 , HOH B:2842
BINDING SITE FOR RESIDUE SO4 B 1104
07
AC7
SOFTWARE
SER A:439 , MET A:440 , ARG A:441 , HOH A:2792 , ARG B:412
BINDING SITE FOR RESIDUE SO4 A 1105
08
AC8
SOFTWARE
SER B:411 , ARG B:412 , LYS B:413
BINDING SITE FOR RESIDUE SO4 B 1106
09
AC9
SOFTWARE
LYS A:212 , ARG A:472
BINDING SITE FOR RESIDUE SO4 A 1107
10
BC1
SOFTWARE
LYS B:212 , ARG B:472 , HOH B:2725
BINDING SITE FOR RESIDUE SO4 B 1108
11
BC2
SOFTWARE
ARG B:369 , HOH B:2823
BINDING SITE FOR RESIDUE SO4 B 1109
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: INTEIN_C_TER (A:98-98,B:98-98)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
INTEIN_C_TER
PS50818
Intein C-terminal splicing motif profile.
RTCB_PYRHO
465-488
2
A:98-98
B:98-98
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1uc2a_ (A:)
1b: SCOP_d1uc2b_ (B:)
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Classes
(
)
(
)
Folds
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(
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(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Hypothetical protein PH1602
(7)
Superfamily
:
Hypothetical protein PH1602
(7)
Family
:
Hypothetical protein PH1602
(6)
Protein domain
:
Hypothetical protein PH1602
(5)
Pyrococcus horikoshii [TaxId: 53953]
(5)
1a
d1uc2a_
A:
1b
d1uc2b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_UPF0027_1uc2B01 (B:98-481)
1b: PFAM_UPF0027_1uc2B02 (B:98-481)
1c: PFAM_UPF0027_1uc2B03 (B:98-481)
1d: PFAM_UPF0027_1uc2B04 (B:98-481)
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Organisms
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)
Clan
:
no clan defined [family: UPF0027]
(1)
Family
:
UPF0027
(1)
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
(1)
1a
UPF0027-1uc2B01
B:98-481
1b
UPF0027-1uc2B02
B:98-481
1c
UPF0027-1uc2B03
B:98-481
1d
UPF0027-1uc2B04
B:98-481
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Asymmetric Unit 1
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