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1U9Y
Asym. Unit
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Asym.Unit (186 KB)
Biol.Unit 1 (182 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHORIBOSYL DIPHOSPHATE SYNTHASE FROM METHANOCALDOCOCCUS JANNASCHII
Authors
:
A. Kadziola, E. Johansson, C. H. Jepsen, J. Mcguire, S. Larsen, B. Hove- Jensen
Date
:
11 Aug 04 (Deposition) - 23 Aug 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.65
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Prpp Synthase, Transferase
(Keyword Search:
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Reference
:
A. Kadziola, C. H. Jepsen, E. Johansson, J. Mcguire, S. Larsen, B. Hove-Jensen
Novel Class Iii Phosphoribosyl Diphosphate Synthase: Structure And Properties Of The Tetrameric, Phosphate-Activated, Non-Allosterically Inhibited Enzyme From Methanocaldococcus Jannaschii
J. Mol. Biol. V. 354 815 2005
(for further references see the
PDB file header
)
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Hetero Components
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Sites
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SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d1u9ya1 (A:1-155)
1b: SCOP_d1u9ya2 (A:156-284)
1c: SCOP_d1u9yb1 (B:1-155)
1d: SCOP_d1u9yb2 (B:156-284)
1e: SCOP_d1u9yc1 (C:1-155)
1f: SCOP_d1u9yc2 (C:156-284)
1g: SCOP_d1u9yd1 (D:1-155)
1h: SCOP_d1u9yd2 (D:156-284)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
Phosphoribosylpyrophosphate synthetase-like
(6)
Protein domain
:
Phosphoribosylpyrophosphate synthetase
(5)
Methanocaldococcus jannaschii [TaxId: 2190]
(2)
1a
d1u9ya1
A:1-155
1b
d1u9ya2
A:156-284
1c
d1u9yb1
B:1-155
1d
d1u9yb2
B:156-284
1e
d1u9yc1
C:1-155
1f
d1u9yc2
C:156-284
1g
d1u9yd1
D:1-155
1h
d1u9yd2
D:156-284
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_1u9yA01 (A:1-141,A:276-284)
1b: CATH_1u9yB01 (B:1-141,B:276-284)
1c: CATH_1u9yC02 (C:142-275)
1d: CATH_1u9yD02 (D:142-275)
1e: CATH_1u9yC01 (C:1-141,C:276-284)
1f: CATH_1u9yD01 (D:1-141,D:276-284)
1g: CATH_1u9yA02 (A:142-275)
1h: CATH_1u9yB02 (B:142-275)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2020, no name defined]
(117)
Methanocaldococcus jannaschii. Organism_taxid: 2190.
(2)
1a
1u9yA01
A:1-141,A:276-284
1b
1u9yB01
B:1-141,B:276-284
1c
1u9yC02
C:142-275
1d
1u9yD02
D:142-275
1e
1u9yC01
C:1-141,C:276-284
1f
1u9yD01
D:1-141,D:276-284
1g
1u9yA02
A:142-275
1h
1u9yB02
B:142-275
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_Pribosyltran_1u9yD01 (D:133-242)
1b: PFAM_Pribosyltran_1u9yD02 (D:133-242)
1c: PFAM_Pribosyltran_1u9yD03 (D:133-242)
1d: PFAM_Pribosyltran_1u9yD04 (D:133-242)
2a: PFAM_Pribosyltran_N_1u9yD05 (D:1-115)
2b: PFAM_Pribosyltran_N_1u9yD06 (D:1-115)
2c: PFAM_Pribosyltran_N_1u9yD07 (D:1-115)
2d: PFAM_Pribosyltran_N_1u9yD08 (D:1-115)
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Clan
:
PRTase-like
(59)
Family
:
Pribosyltran
(59)
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Meth
(2)
1a
Pribosyltran-1u9yD01
D:133-242
1b
Pribosyltran-1u9yD02
D:133-242
1c
Pribosyltran-1u9yD03
D:133-242
1d
Pribosyltran-1u9yD04
D:133-242
Clan
:
no clan defined [family: Pribosyltran_N]
(7)
Family
:
Pribosyltran_N
(7)
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Meth
(2)
2a
Pribosyltran_N-1u9yD05
D:1-115
2b
Pribosyltran_N-1u9yD06
D:1-115
2c
Pribosyltran_N-1u9yD07
D:1-115
2d
Pribosyltran_N-1u9yD08
D:1-115
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