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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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1U4G
Asym. Unit
Info
Asym.Unit (57 KB)
Biol.Unit 1 (53 KB)
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(1)
Title
:
ELASTASE OF PSEUDOMONAS AERUGINOSA WITH AN INHIBITOR
Authors
:
E. Bitto, D. B. Mckay
Date
:
25 Jul 04 (Deposition) - 24 Aug 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
X-Ray Structure; Elastase; Inhibition; Peptidase Family M4, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Bitto, D. B. Mckay
Elastase Of Pseudomonas Aeruginosa With An Inhibitor
To Be Published 2004
(for further references see the
PDB file header
)
[
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Hetero Components
(4, 4)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: N-(1-CARBOXY-3-PHENYLPROPYL)PHENYL... (HPIa)
3a: SULFATE ION (SO4a)
4a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
HPI
1
Ligand/Ion
N-(1-CARBOXY-3-PHENYLPROPYL)PHENYLALANYL-ALPHA-ASPARAGINE
3
SO4
1
Ligand/Ion
SULFATE ION
4
ZN
1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:140 , HIS A:144 , GLU A:164 , HPI A:800
BINDING SITE FOR RESIDUE ZN A 9800
2
AC2
SOFTWARE
ASP A:136 , GLU A:172 , GLU A:175 , ASP A:183 , LEU A:185
BINDING SITE FOR RESIDUE CA A 401
3
AC3
SOFTWARE
GLY A:241 , LYS A:246 , TYR A:281 , SER A:282 , HOH A:815 , HOH A:9819 , HOH A:9967
BINDING SITE FOR RESIDUE SO4 A 400
4
AC4
SOFTWARE
ASN A:112 , ALA A:113 , TYR A:114 , VAL A:137 , HIS A:140 , GLU A:141 , HIS A:144 , GLU A:164 , ILE A:186 , GLY A:187 , LEU A:197 , ARG A:198 , HIS A:223 , SER A:239 , ARG A:288 , ZN A:9800 , HOH A:9810 , HOH A:9856
BINDING SITE FOR RESIDUE HPI A 800
[
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_ELAS_PSEAE_004 (K14I, chain A, )
2: VAR_ELAS_PSEAE_005 (S44G, chain A, )
3: VAR_ELAS_PSEAE_006 (K85D, chain A, )
4: VAR_ELAS_PSEAE_007 (M128V, chain A, )
5: VAR_ELAS_PSEAE_008 (R274S, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_ELAS_PSEAE_004
*
K
211
I
ELAS_PSEAE
---
---
A
K
14
I
2
UniProt
VAR_ELAS_PSEAE_005
*
S
241
G
ELAS_PSEAE
---
---
A
S
44
G
3
UniProt
VAR_ELAS_PSEAE_006
*
K
282
D
ELAS_PSEAE
---
---
A
K
85
D
4
UniProt
VAR_ELAS_PSEAE_007
*
M
325
V
ELAS_PSEAE
---
---
A
M
128
V
5
UniProt
VAR_ELAS_PSEAE_008
*
R
471
S
ELAS_PSEAE
---
---
A
R
274
S
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:137-146)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
ELAS_PSEAE
334-343
1
A:137-146
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1u4ga_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Thermolysin-like
(130)
Protein domain
:
Elastase
(3)
Pseudomonas aeruginosa [TaxId: 287]
(3)
1a
d1u4ga_
A:
[
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1u4gA01 (A:1-152)
2a: CATH_1u4gA02 (A:153-298)
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Classes
(
)
(
)
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Elastase; domain 1
(68)
Homologous Superfamily
:
[code=3.10.170.10, no name defined]
(67)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
1a
1u4gA01
A:1-152
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Neutral Protease; domain 2
(68)
Homologous Superfamily
:
Neutral Protease Domain 2
(68)
Pseudomonas aeruginosa. Organism_taxid: 287.
(2)
2a
1u4gA02
A:153-298
[
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Peptidase_M4_1u4gA01 (A:7-149)
2a: PFAM_Peptidase_M4_C_1u4gA02 (A:151-295)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Peptidase_MA
(251)
Family
:
Peptidase_M4
(54)
Pseudomonas aeruginosa
(1)
1a
Peptidase_M4-1u4gA01
A:7-149
Family
:
Peptidase_M4_C
(54)
Pseudomonas aeruginosa
(1)
2a
Peptidase_M4_C-1u4gA02
A:151-295
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Chain A
Asymmetric Unit 1
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