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1U0H
Asym. Unit
Info
Asym.Unit (126 KB)
Biol.Unit 1 (119 KB)
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(1)
Title
:
STRUCTURAL BASIS FOR THE INHIBITION OF MAMMALIAN ADENYLYL CYCLASE BY MANT-GTP
Authors
:
T. C. Mou, A. Gille, R. J. Seifert, S. R. Sprang
Date
:
13 Jul 04 (Deposition) - 14 Dec 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Adenylyl Cyclase, Gsa, Mant-Gtp, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. C. Mou, A. Gille, D. A. Fancy, R. Seifert, S. R. Sprang
Structural Basis For The Inhibition Of Mammalian Membrane Adenylyl Cyclase By 2 '(3')-O-(N-Methylanthraniloyl)-Guanosine 5 '-Triphosphate.
J. Biol. Chem. V. 280 7253 2005
(for further references see the
PDB file header
)
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Hetero Components
(5, 7)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: FORSKOLIN (FOKa)
3a: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOP... (GSPa)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
4c: MAGNESIUM ION (MGc)
5a: 3'-O-(N-METHYLANTHRANILOYL)-GUANOS... (ONMa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
FOK
1
Ligand/Ion
FORSKOLIN
3
GSP
1
Ligand/Ion
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
4
MG
3
Ligand/Ion
MAGNESIUM ION
5
ONM
1
Ligand/Ion
3'-O-(N-METHYLANTHRANILOYL)-GUANOSINE-5'-TRIPHOSPHATE
[
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER C:54 , THR C:204 , ASP C:223 , VAL C:224 , GSP C:395
BINDING SITE FOR RESIDUE MG C 396
2
AC2
SOFTWARE
ALA C:249
BINDING SITE FOR RESIDUE CL C 397
3
AC3
SOFTWARE
ONM A:100 , ASP A:396 , ASP A:440 , CYS A:441
BINDING SITE FOR RESIDUE MG A 581
4
AC4
SOFTWARE
ONM A:100 , ASP A:396 , ILE A:397 , GLU A:398 , ASP A:440
BINDING SITE FOR RESIDUE MG A 582
5
AC5
SOFTWARE
GLU C:50 , SER C:51 , GLY C:52 , LYS C:53 , SER C:54 , THR C:55 , ASP C:173 , LEU C:198 , ARG C:199 , CYS C:200 , ARG C:201 , VAL C:202 , THR C:204 , VAL C:224 , GLY C:225 , GLY C:226 , ASN C:292 , LYS C:293 , ASP C:295 , LEU C:296 , CYS C:365 , ALA C:366 , VAL C:367 , MG C:396
BINDING SITE FOR RESIDUE GSP C 395
6
AC6
SOFTWARE
HOH A:17 , TYR A:443 , ASP A:505 , VAL A:506 , TRP A:507 , SER A:508 , VAL A:511 , THR A:512 , ASN A:515 , GLY B:941 , SER B:942
BINDING SITE FOR RESIDUE FOK A 101
7
AC7
SOFTWARE
ASP A:396 , ILE A:397 , GLY A:399 , PHE A:400 , THR A:401 , ALA A:404 , ALA A:409 , LEU A:438 , GLY A:439 , ASP A:440 , MG A:581 , MG A:582 , ASP B:1018 , ILE B:1019 , TRP B:1020 , GLY B:1021 , ASN B:1025 , LYS B:1065
BINDING SITE FOR RESIDUE ONM A 100
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: GUANYLATE_CYCLASE_2 (-|B:886-1031,A:391-518|-)
2: GUANYLATE_CYCLASE_1 (-|B:1008-1031,A:495-518|-)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GUANYLATE_CYCLASE_2
PS50125
Guanylate cyclase domain profile.
ADCY2_RAT
289-416
886-1031
1
-
B:886-1031
ADCY5_CANLF
472-599
1075-1214
1
A:391-518
-
2
GUANYLATE_CYCLASE_1
PS00452
Guanylate cyclase signature.
ADCY2_RAT
393-416
1008-1031
1
-
B:1008-1031
ADCY5_CANLF
576-599
1191-1214
1
A:495-518
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(4, 4)
Info
All SCOP Domains
1a: SCOP_d1u0hc1 (C:86-201)
2a: SCOP_d1u0ha_ (A:)
3a: SCOP_d1u0hb_ (B:)
4a: SCOP_d1u0hc2 (C:39-65,C:202-388)
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)
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)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Transducin (alpha subunit), insertion domain
(49)
Superfamily
:
Transducin (alpha subunit), insertion domain
(49)
Family
:
Transducin (alpha subunit), insertion domain
(49)
Protein domain
:
Transducin (alpha subunit), insertion domain
(49)
Cow (Bos taurus) [TaxId: 9913]
(18)
1a
d1u0hc1
C:86-201
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
Nucleotide cyclase
(51)
Family
:
Adenylyl and guanylyl cyclase catalytic domain
(42)
Protein domain
:
Adenylyl cyclase VC1, domain C1a
(15)
Dog (Canis familiaris) [TaxId: 9615]
(15)
2a
d1u0ha_
A:
Protein domain
:
Type II adenylyl cyclase C2 domain
(9)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(9)
3a
d1u0hb_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
Transducin (alpha subunit)
(51)
Cow (Bos taurus) [TaxId: 9913]
(18)
4a
d1u0hc2
C:39-65,C:202-388
[
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CATH Domains
(3, 4)
Info
all CATH domains
1a: CATH_1u0hA00 (A:377-565)
1b: CATH_1u0hB00 (B:879-1077)
2a: CATH_1u0hC01 (C:39-88,C:204-386)
3a: CATH_1u0hC02 (C:89-203)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
Adenylyl Cyclase, chain A
(19)
Dog (Canis lupus familiaris)
(14)
1a
1u0hA00
A:377-565
1b
1u0hB00
B:879-1077
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Dog (Canis lupus familiaris)
(19)
2a
1u0hC01
C:39-88,C:204-386
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
GI Alpha 1, domain 2-like
(67)
Homologous Superfamily
:
GI Alpha 1, domain 2-like
(66)
Dog (Canis lupus familiaris)
(14)
3a
1u0hC02
C:89-203
[
close CATH info
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Guanylate_cyc_1u0hB01 (B:879-1077)
2a: PFAM_G_alpha_1u0hC01 (C:39-388)
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Clans
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)
(
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Families
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(
)
Organisms
(
)
(
)
Clan
:
Nucleot_cyclase
(14)
Family
:
Guanylate_cyc
(8)
Rattus norvegicus (Rat)
(2)
1a
Guanylate_cyc-1u0hB01
B:879-1077
Clan
:
P-loop_NTPase
(1112)
Family
:
G-alpha
(24)
Bos taurus (Bovine)
(8)
2a
G-alpha-1u0hC01
C:39-388
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Protein & NOT PROSITE
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Chain C
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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