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Getting 'PROSITE' information from database.
1TZO
Biol. Unit 1
Info
Asym.Unit (1.2 MB)
Biol.Unit 1 (625 KB)
Biol.Unit 2 (624 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE ANTHRAX TOXIN PROTECTIVE ANTIGEN HEPTAMERIC PREPORE
Authors
:
D. B. Lacy, D. J. Wigelsworth, R. A. Melnyk, R. J. Collier
Date
:
10 Jul 04 (Deposition) - 17 Aug 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.60
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,O
Biol. Unit 1: A,B,C,D,E,F,O (1x)
Biol. Unit 2: G,H,I,J,K,L,M (1x)
Keywords
:
Heptamer, Toxin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. B. Lacy, D. J. Wigelsworth, R. A. Melnyk, S. C. Harrison, R. J. Collie
Structure Of Heptameric Protective Antigen Bound To An Anthrax Toxin Receptor: A Role For Receptor In Ph-Dependent Pore Formation
Proc. Natl. Acad. Sci. Usa V. 101 13147 2004
[
close entry info
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1aa: CALCIUM ION (CAaa)
1ab: CALCIUM ION (CAab)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
1m: CALCIUM ION (CAm)
1n: CALCIUM ION (CAn)
1o: CALCIUM ION (CAo)
1p: CALCIUM ION (CAp)
1q: CALCIUM ION (CAq)
1r: CALCIUM ION (CAr)
1s: CALCIUM ION (CAs)
1t: CALCIUM ION (CAt)
1u: CALCIUM ION (CAu)
1v: CALCIUM ION (CAv)
1w: CALCIUM ION (CAw)
1x: CALCIUM ION (CAx)
1y: CALCIUM ION (CAy)
1z: CALCIUM ION (CAz)
View:
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Label:
Sorry, no Info available
[
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: CC9 (SOFTWARE)
14: DC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:177 , ASP A:179 , ASP A:181 , ILE A:183 , GLU A:188
BINDING SITE FOR RESIDUE CA A 736
02
AC2
SOFTWARE
ASP A:179 , ASP A:181 , GLU A:188 , SER A:222 , LYS A:225 , ASP A:235
BINDING SITE FOR RESIDUE CA A 737
03
AC3
SOFTWARE
ASP B:177 , ASP B:179 , ASP B:181 , ILE B:183 , GLU B:188
BINDING SITE FOR RESIDUE CA B 736
04
AC4
SOFTWARE
ASP B:179 , ASP B:181 , GLU B:188 , SER B:222 , LYS B:225 , ASP B:235
BINDING SITE FOR RESIDUE CA B 737
05
AC5
SOFTWARE
ASP C:177 , ASP C:179 , ASP C:181 , ILE C:183 , GLU C:188
BINDING SITE FOR RESIDUE CA C 736
06
AC6
SOFTWARE
ASP C:179 , ASP C:181 , GLU C:188 , SER C:222 , LYS C:225 , ASP C:235
BINDING SITE FOR RESIDUE CA C 737
07
AC7
SOFTWARE
ASP D:177 , ASP D:179 , ASP D:181 , ILE D:183 , GLU D:188
BINDING SITE FOR RESIDUE CA D 736
08
AC8
SOFTWARE
ASP D:179 , ASP D:181 , GLU D:188 , SER D:222 , LYS D:225 , ASP D:235
BINDING SITE FOR RESIDUE CA D 737
09
AC9
SOFTWARE
ASP E:177 , ASP E:179 , ASP E:181 , ILE E:183 , GLU E:188
BINDING SITE FOR RESIDUE CA E 736
10
BC1
SOFTWARE
ASP E:179 , ASP E:181 , GLU E:188 , SER E:222 , LYS E:225 , ASP E:235
BINDING SITE FOR RESIDUE CA E 737
11
BC2
SOFTWARE
ASP F:177 , ASP F:179 , ASP F:181 , ILE F:183 , GLU F:188
BINDING SITE FOR RESIDUE CA F 736
12
BC3
SOFTWARE
ASP F:179 , ASP F:181 , GLU F:188 , SER F:222 , LYS F:225 , ASP F:235
BINDING SITE FOR RESIDUE CA F 737
13
CC9
SOFTWARE
ASP O:177 , ASP O:179 , ASP O:181 , ILE O:183 , GLU O:188
BINDING SITE FOR RESIDUE CA O 736
14
DC1
SOFTWARE
ASP O:179 , ASP O:181 , GLU O:188 , SER O:222 , LYS O:225 , ASP O:235
BINDING SITE FOR RESIDUE CA O 737
[
close Site info
]
SAPs(SNPs)/Variants
(5, 35)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_PAG_BACAN_001 (M266I, chain A/B/C/D/E/F/O, )
2: VAR_PAG_BACAN_002 (N363D, chain A/B/C/D/E/F/O, )
3: VAR_PAG_BACAN_003 (F531L, chain A/B/C/D/E/F/O, )
4: VAR_PAG_BACAN_004 (P536S, chain A/B/C/D/E/F/O, )
5: VAR_PAG_BACAN_005 (A571V, chain A/B/C/D/E/F/O, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_PAG_BACAN_001
*
M
295
I
PAG_BACAN
---
---
A/B/C/D/E/F/O
M
266
I
2
UniProt
VAR_PAG_BACAN_002
*
N
392
D
PAG_BACAN
---
---
A/B/C/D/E/F/O
N
363
D
3
UniProt
VAR_PAG_BACAN_003
*
F
560
L
PAG_BACAN
---
---
A/B/C/D/E/F/O
F
531
L
4
UniProt
VAR_PAG_BACAN_004
*
P
565
S
PAG_BACAN
---
---
A/B/C/D/E/F/O
P
536
S
5
UniProt
VAR_PAG_BACAN_005
*
A
600
V
PAG_BACAN
---
---
A/B/C/D/E/F/O
A
571
V
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 28)
Info
All SCOP Domains
1a: SCOP_d1tzoa2 (A:174-225)
1b: SCOP_d1tzob2 (B:174-225)
1c: SCOP_d1tzoc2 (C:174-225)
1d: SCOP_d1tzod2 (D:174-225)
1e: SCOP_d1tzoe2 (E:174-225)
1f: SCOP_d1tzof2 (F:174-225)
1g: SCOP_d1tzog2 (G:174-225)
1h: SCOP_d1tzoh2 (H:174-225)
1i: SCOP_d1tzoi2 (I:174-225)
1j: SCOP_d1tzoj2 (J:174-225)
1k: SCOP_d1tzok2 (K:174-225)
1l: SCOP_d1tzol2 (L:174-225)
1m: SCOP_d1tzom2 (M:174-225)
1n: SCOP_d1tzoo2 (O:174-225)
2a: SCOP_d1tzoa1 (A:226-735)
2b: SCOP_d1tzob1 (B:226-735)
2c: SCOP_d1tzoc1 (C:226-735)
2d: SCOP_d1tzod1 (D:226-735)
2e: SCOP_d1tzoe1 (E:226-735)
2f: SCOP_d1tzof1 (F:226-735)
2g: SCOP_d1tzog1 (G:226-735)
2h: SCOP_d1tzoh1 (H:226-735)
2i: SCOP_d1tzoi1 (I:226-735)
2j: SCOP_d1tzoj1 (J:226-735)
2k: SCOP_d1tzok1 (K:226-735)
2l: SCOP_d1tzol1 (L:226-735)
2m: SCOP_d1tzom1 (M:226-735)
2n: SCOP_d1tzoo1 (O:226-735)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Anthrax protective antigen N-terminal-like
(32)
Superfamily
:
PA14-like
(32)
Family
:
PA14
(16)
Protein domain
:
PA14
(14)
Bacillus anthracis
(14)
1a
d1tzoa2
A:174-225
1b
d1tzob2
B:174-225
1c
d1tzoc2
C:174-225
1d
d1tzod2
D:174-225
1e
d1tzoe2
E:174-225
1f
d1tzof2
F:174-225
1g
d1tzog2
G:174-225
1h
d1tzoh2
H:174-225
1i
d1tzoi2
I:174-225
1j
d1tzoj2
J:174-225
1k
d1tzok2
K:174-225
1l
d1tzol2
L:174-225
1m
d1tzom2
M:174-225
1n
d1tzoo2
O:174-225
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
Anthrax protective antigen C-terminal-like
(15)
Superfamily
:
Anthrax protective antigen C-terminal-like
(15)
Family
:
Anthrax protective antigen C-terminal-like
(15)
Protein domain
:
Anthrax protective antigen C-terminal-like
(14)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(14)
2a
d1tzoa1
A:226-735
2b
d1tzob1
B:226-735
2c
d1tzoc1
C:226-735
2d
d1tzod1
D:226-735
2e
d1tzoe1
E:226-735
2f
d1tzof1
F:226-735
2g
d1tzog1
G:226-735
2h
d1tzoh1
H:226-735
2i
d1tzoi1
I:226-735
2j
d1tzoj1
J:226-735
2k
d1tzok1
K:226-735
2l
d1tzol1
L:226-735
2m
d1tzom1
M:226-735
2n
d1tzoo1
O:226-735
[
close SCOP info
]
CATH Domains
(3, 42)
Info
all CATH domains
1a: CATH_1tzoA03 (A:486-604)
1b: CATH_1tzoB03 (B:486-604)
1c: CATH_1tzoK03 (K:486-604)
1d: CATH_1tzoL03 (L:486-604)
1e: CATH_1tzoM03 (M:486-604)
1f: CATH_1tzoO03 (O:486-604)
1g: CATH_1tzoC03 (C:486-604)
1h: CATH_1tzoD03 (D:486-604)
1i: CATH_1tzoE03 (E:486-604)
1j: CATH_1tzoF03 (F:486-604)
1k: CATH_1tzoG03 (G:486-604)
1l: CATH_1tzoH03 (H:486-604)
1m: CATH_1tzoI03 (I:486-604)
1n: CATH_1tzoJ03 (J:486-604)
2a: CATH_1tzoA04 (A:605-735)
2b: CATH_1tzoB04 (B:605-735)
2c: CATH_1tzoK04 (K:605-735)
2d: CATH_1tzoL04 (L:605-735)
2e: CATH_1tzoM04 (M:605-735)
2f: CATH_1tzoO04 (O:605-735)
2g: CATH_1tzoC04 (C:605-735)
2h: CATH_1tzoD04 (D:605-735)
2i: CATH_1tzoE04 (E:605-735)
2j: CATH_1tzoF04 (F:605-735)
2k: CATH_1tzoG04 (G:605-735)
2l: CATH_1tzoH04 (H:605-735)
2m: CATH_1tzoI04 (I:605-735)
2n: CATH_1tzoJ04 (J:605-735)
3a: CATH_1tzoA02 (A:259-485)
3b: CATH_1tzoB02 (B:259-485)
3c: CATH_1tzoK02 (K:259-485)
3d: CATH_1tzoL02 (L:259-485)
3e: CATH_1tzoM02 (M:259-485)
3f: CATH_1tzoO02 (O:259-485)
3g: CATH_1tzoC02 (C:259-485)
3h: CATH_1tzoD02 (D:259-485)
3i: CATH_1tzoE02 (E:259-485)
3j: CATH_1tzoF02 (F:259-485)
3k: CATH_1tzoG02 (G:259-485)
3l: CATH_1tzoH02 (H:259-485)
3m: CATH_1tzoI02 (I:259-485)
3n: CATH_1tzoJ02 (J:259-485)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Ubiquitin-like (UB roll)
(674)
Homologous Superfamily
:
[code=3.10.20.110, no name defined]
(3)
A2012 (Bacillus anthracis str)
(1)
1a
1tzoA03
A:486-604
1b
1tzoB03
B:486-604
1c
1tzoK03
K:486-604
1d
1tzoL03
L:486-604
1e
1tzoM03
M:486-604
1f
1tzoO03
O:486-604
1g
1tzoC03
C:486-604
1h
1tzoD03
D:486-604
1i
1tzoE03
E:486-604
1j
1tzoF03
F:486-604
1k
1tzoG03
G:486-604
1l
1tzoH03
H:486-604
1m
1tzoI03
I:486-604
1n
1tzoJ03
J:486-604
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.810, no name defined]
(4)
A2012 (Bacillus anthracis str)
(1)
2a
1tzoA04
A:605-735
2b
1tzoB04
B:605-735
2c
1tzoK04
K:605-735
2d
1tzoL04
L:605-735
2e
1tzoM04
M:605-735
2f
1tzoO04
O:605-735
2g
1tzoC04
C:605-735
2h
1tzoD04
D:605-735
2i
1tzoE04
E:605-735
2j
1tzoF04
F:605-735
2k
1tzoG04
G:605-735
2l
1tzoH04
H:605-735
2m
1tzoI04
I:605-735
2n
1tzoJ04
J:605-735
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.240, no name defined]
(3)
A2012 (Bacillus anthracis str)
(1)
3a
1tzoA02
A:259-485
3b
1tzoB02
B:259-485
3c
1tzoK02
K:259-485
3d
1tzoL02
L:259-485
3e
1tzoM02
M:259-485
3f
1tzoO02
O:259-485
3g
1tzoC02
C:259-485
3h
1tzoD02
D:259-485
3i
1tzoE02
E:259-485
3j
1tzoF02
F:259-485
3k
1tzoG02
G:259-485
3l
1tzoH02
H:259-485
3m
1tzoI02
I:259-485
3n
1tzoJ02
J:259-485
[
close CATH info
]
Pfam Domains
(1, 14)
Info
all PFAM domains
1a: PFAM_Binary_toxB_1tzoO01 (O:175-599)
1b: PFAM_Binary_toxB_1tzoO02 (O:175-599)
1c: PFAM_Binary_toxB_1tzoO03 (O:175-599)
1d: PFAM_Binary_toxB_1tzoO04 (O:175-599)
1e: PFAM_Binary_toxB_1tzoO05 (O:175-599)
1f: PFAM_Binary_toxB_1tzoO06 (O:175-599)
1g: PFAM_Binary_toxB_1tzoO07 (O:175-599)
1h: PFAM_Binary_toxB_1tzoO08 (O:175-599)
1i: PFAM_Binary_toxB_1tzoO09 (O:175-599)
1j: PFAM_Binary_toxB_1tzoO10 (O:175-599)
1k: PFAM_Binary_toxB_1tzoO11 (O:175-599)
1l: PFAM_Binary_toxB_1tzoO12 (O:175-599)
1m: PFAM_Binary_toxB_1tzoO13 (O:175-599)
1n: PFAM_Binary_toxB_1tzoO14 (O:175-599)
View:
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Clans
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)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Binary_toxB]
(4)
Family
:
Binary_toxB
(4)
Bacillus anthracis
(4)
1a
Binary_toxB-1tzoO01
O:175-599
1b
Binary_toxB-1tzoO02
O:175-599
1c
Binary_toxB-1tzoO03
O:175-599
1d
Binary_toxB-1tzoO04
O:175-599
1e
Binary_toxB-1tzoO05
O:175-599
1f
Binary_toxB-1tzoO06
O:175-599
1g
Binary_toxB-1tzoO07
O:175-599
1h
Binary_toxB-1tzoO08
O:175-599
1i
Binary_toxB-1tzoO09
O:175-599
1j
Binary_toxB-1tzoO10
O:175-599
1k
Binary_toxB-1tzoO11
O:175-599
1l
Binary_toxB-1tzoO12
O:175-599
1m
Binary_toxB-1tzoO13
O:175-599
1n
Binary_toxB-1tzoO14
O:175-599
[
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