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1TZC
Asym. Unit
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Asym.Unit (111 KB)
Biol.Unit 1 (106 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE/PHOSPHOMANNOSE ISOMERASE FROM PYROBACULUM AEROPHILUM IN COMPLEX WITH 5-PHOSPHOARABINONATE
Authors
:
M. K. Swan, T. Hansen, P. Schoenheit, C. Davies
Date
:
09 Jul 04 (Deposition) - 20 Jul 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.45
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Enzyme, Crenarchaeon, Hyperthermophile, Pgi Family, Isomerase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. K. Swan, T. Hansen, P. Schoenheit, C. Davies
A Novel Phosphoglucose/Phosphomannose Isomease From The Crenarchaeon Pyrobaculum Aerophilum Is A Member Of The Pgi Superfamily: Structural Evidence At 1. 16 A Resolution
J. Biol. Chem. V. 279 39838 2004
(for further references see the
PDB file header
)
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
2a: 5-PHOSPHOARABINONIC ACID (PA5a)
2b: 5-PHOSPHOARABINONIC ACID (PA5b)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
View:
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Label:
No.
Name
Count
Type
Full Name
1
GOL
2
Ligand/Ion
GLYCEROL
2
PA5
2
Ligand/Ion
5-PHOSPHOARABINONIC ACID
3
SO4
5
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:181 , ARG A:284 , HOH A:780 , HOH A:809 , ARG B:106 , HOH B:761
BINDING SITE FOR RESIDUE SO4 A 451
2
AC2
SOFTWARE
ARG B:104 , ARG B:105
BINDING SITE FOR RESIDUE SO4 B 452
3
AC3
SOFTWARE
GLN B:179 , ARG B:181 , ARG B:284 , HOH B:775
BINDING SITE FOR RESIDUE SO4 B 453
4
AC4
SOFTWARE
HOH A:771 , ARG B:299 , ARG B:300
BINDING SITE FOR RESIDUE SO4 B 454
5
AC5
SOFTWARE
ARG A:104 , ARG A:105
BINDING SITE FOR RESIDUE SO4 A 455
6
AC6
SOFTWARE
MET A:45 , GLY A:46 , GLY A:47 , SER A:48 , SER A:87 , TYR A:88 , SER A:89 , THR A:92 , PRO A:134 , ARG A:135 , GLU A:203 , LYS A:298 , HOH A:601 , HOH A:617 , HOH A:705 , HIS B:219
BINDING SITE FOR RESIDUE PA5 A 600
7
AC7
SOFTWARE
HIS A:219 , MET B:45 , GLY B:46 , GLY B:47 , SER B:48 , SER B:87 , TYR B:88 , SER B:89 , THR B:92 , PRO B:134 , ARG B:135 , GLU B:203 , LYS B:298 , HOH B:608 , HOH B:622 , HOH B:645 , HOH B:648
BINDING SITE FOR RESIDUE PA5 B 601
8
AC8
SOFTWARE
THR A:233 , GLN A:242 , HOH A:708 , HOH A:811
BINDING SITE FOR RESIDUE GOL A 501
9
AC9
SOFTWARE
PHE A:75 , LYS A:77 , SER B:59 , LEU B:60 , ASN B:63 , HOH B:806
BINDING SITE FOR RESIDUE GOL B 502
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: SIS (A:27-160,B:27-160)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SIS
PS51464
SIS domain profile.
PGMI_PYRAE
27-160
2
A:27-160
B:27-160
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1tzca_ (A:)
1b: SCOP_d1tzcb_ (B:)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
SIS domain
(85)
Superfamily
:
SIS domain
(85)
Family
:
double-SIS domain
(16)
Protein domain
:
Glucose-6-phosphate isomerase, conjectural
(4)
Pyrobaculum aerophilum [TaxId: 13773]
(4)
1a
d1tzca_
A:
1b
d1tzcb_
B:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_1tzcA01 (A:2-163)
1b: CATH_1tzcB01 (B:2-163)
1c: CATH_1tzcA02 (A:164-302)
1d: CATH_1tzcB02 (B:164-302)
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(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Glucose-6-phosphate isomerase like protein; domain 1
(105)
Im2 (Pyrobaculum aerophilum str)
(2)
1a
1tzcA01
A:2-163
1b
1tzcB01
B:2-163
1c
1tzcA02
A:164-302
1d
1tzcB02
B:164-302
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (111 KB)
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