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1TV8
Asym. Unit
Info
Asym.Unit (119 KB)
Biol.Unit 1 (112 KB)
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(1)
Title
:
STRUCTURE OF MOAA IN COMPLEX WITH S-ADENOSYLMETHIONINE
Authors
:
P. Haenzelmann, H. Schindelin
Date
:
28 Jun 04 (Deposition) - 31 Aug 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Tim Barrel, Ligand Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Hanzelmann, H. Schindelin
Crystal Structure Of The S-Adenosylmethionine-Dependent Enzyme Moaa And Its Implications For Molybdenum Cofactor Deficiency In Humans.
Proc. Natl. Acad. Sci. Usa V. 101 12870 2004
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-D... (DTUa)
2a: S-ADENOSYLMETHIONINE (SAMa)
2b: S-ADENOSYLMETHIONINE (SAMb)
3a: IRON/SULFUR CLUSTER (SF4a)
3b: IRON/SULFUR CLUSTER (SF4b)
3c: IRON/SULFUR CLUSTER (SF4c)
3d: IRON/SULFUR CLUSTER (SF4d)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
DTU
1
Ligand/Ion
(2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL
2
SAM
2
Ligand/Ion
S-ADENOSYLMETHIONINE
3
SF4
4
Ligand/Ion
IRON/SULFUR CLUSTER
4
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:30 , SER A:126 , LEU A:127 , ASP A:128 , PHE A:135 , HOH A:1528
BINDING SITE FOR RESIDUE SO4 A 1403
2
AC2
SOFTWARE
CYS B:28 , SER B:126 , LEU B:127 , ASP B:128 , PHE B:135 , HOH B:2506
BINDING SITE FOR RESIDUE SO4 B 2403
3
AC3
SOFTWARE
TYR A:30 , THR A:73 , GLY A:75 , GLU A:76 , THR A:102 , THR A:103 , ASN A:104 , SER A:126 , VAL A:167 , PHE A:196 , MET A:197 , SF4 A:1401 , HOH A:1570
BINDING SITE FOR RESIDUE SAM A 1501
4
AC4
SOFTWARE
TYR B:30 , THR B:73 , GLY B:75 , GLU B:76 , THR B:102 , THR B:103 , ASN B:104 , SER B:126 , VAL B:167 , MET B:197 , SF4 B:2401 , HOH B:2506 , HOH B:2517 , HOH B:2525
BINDING SITE FOR RESIDUE SAM B 2501
5
AC5
SOFTWARE
CYS A:24 , PHE A:26 , CYS A:28 , CYS A:31 , MET A:32 , GLY A:75 , ASN A:104 , SAM A:1501
BINDING SITE FOR RESIDUE SF4 A 1401
6
AC6
SOFTWARE
CYS A:261 , CYS A:264 , CYS A:278 , LEU A:279 , TYR A:316 , SER A:317 , DTU A:1502
BINDING SITE FOR RESIDUE SF4 A 1402
7
AC7
SOFTWARE
CYS B:24 , PHE B:26 , CYS B:28 , CYS B:31 , MET B:32 , GLY B:75 , ASN B:104 , SAM B:2501
BINDING SITE FOR RESIDUE SF4 B 2401
8
AC8
SOFTWARE
CYS B:261 , CYS B:264 , CYS B:278 , LEU B:279 , ASP B:314 , SER B:317
BINDING SITE FOR RESIDUE SF4 B 2402
9
AC9
SOFTWARE
SER A:255 , PHE A:260 , ARG A:266 , LEU A:279 , SF4 A:1402
BINDING SITE FOR RESIDUE DTU A 1502
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: MOAA_NIFB_PQQE (A:20-31,B:20-31,A:20-31,B:20-31)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
MOAA_NIFB_PQQE
PS01305
moaA / nifB / pqqE family signature.
MOAA_STAA8
20-31
2
A:20-31
B:20-31
MOAA_STAAN
20-31
2
A:20-31
B:20-31
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1tv8a_ (A:)
1b: SCOP_d1tv8b_ (B:)
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Protein Domains
(
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Radical SAM enzymes
(6)
Family
:
MoCo biosynthesis proteins
(4)
Protein domain
:
Molybdenum cofactor biosynthesis protein A MoaA
(4)
Staphylococcus aureus [TaxId: 1280]
(4)
1a
d1tv8a_
A:
1b
d1tv8b_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Fer4_14_1tv8B01 (B:19-131)
1b: PFAM_Fer4_14_1tv8B02 (B:19-131)
2a: PFAM_Mob_synth_C_1tv8B03 (B:189-318)
2b: PFAM_Mob_synth_C_1tv8B04 (B:189-318)
3a: PFAM_Radical_SAM_1tv8B05 (B:18-184)
3b: PFAM_Radical_SAM_1tv8B06 (B:18-184)
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Clans
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(
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Organisms
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)
(
)
Clan
:
4Fe-4S
(51)
Family
:
Fer4_14
(2)
Staphylococcus aureus (strain N315)
(2)
1a
Fer4_14-1tv8B01
B:19-131
1b
Fer4_14-1tv8B02
B:19-131
Clan
:
no clan defined [family: Mob_synth_C]
(2)
Family
:
Mob_synth_C
(2)
Staphylococcus aureus (strain N315)
(2)
2a
Mob_synth_C-1tv8B03
B:189-318
2b
Mob_synth_C-1tv8B04
B:189-318
Clan
:
no clan defined [family: Radical_SAM]
(7)
Family
:
Radical_SAM
(7)
Staphylococcus aureus (strain N315)
(2)
3a
Radical_SAM-1tv8B05
B:18-184
3b
Radical_SAM-1tv8B06
B:18-184
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Asymmetric Unit 1
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Asym.Unit (119 KB)
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