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1TE1
Asym. Unit
Info
Asym.Unit (85 KB)
Biol.Unit 1 (79 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FAMILY 11 XYLANASE IN COMPLEX WITH INHIBITOR (XIP-I)
Authors
:
F. Payan, P. Leone, C. Furniss, T. Tahir, A. Durand, S. Porciero, P. Manz G. Williamson, H. J. Gilbert, N. Juge, A. Roussel
Date
:
24 May 04 (Deposition) - 20 Jul 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Beta/Alpha Barrel (Xip-I) And Beta Jelly Roll (Gh11), Hydrolase Inhibitor-Hydrolase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Payan, P. Leone, S. Porciero, C. Furniss, T. Tahir, G. Williamson, A. Durand, P. Manzanares, H. J. Gilbert, N. Juge, A. Roussel
The Dual Nature Of The Wheat Xylanase Protein Inhibitor Xip-I: Structural Basis For The Inhibition Of Family 10 And Family 11 Xylanases.
J. Biol. Chem. V. 279 36029 2004
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Hetero Components
(2, 13)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
11
Ligand/Ion
1,2-ETHANEDIOL
2
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:165 , TYR A:166 , PRO A:167 , LYS A:262 , GLN A:263 , ASN A:265
BINDING SITE FOR RESIDUE NAG A 900
02
AC2
SOFTWARE
ASN A:89 , HOH A:964 , HOH A:1009
BINDING SITE FOR RESIDUE NAG A 901
03
AC3
SOFTWARE
THR A:222 , ASP A:224 , SER A:227 , TRP A:256 , HOH A:961
BINDING SITE FOR RESIDUE EDO A 902
04
AC4
SOFTWARE
ALA A:214 , ARG A:216
BINDING SITE FOR RESIDUE EDO A 903
05
AC5
SOFTWARE
ARG A:22 , HOH A:943
BINDING SITE FOR RESIDUE EDO A 904
06
AC6
SOFTWARE
LEU A:199 , GLY A:200 , GLY A:203
BINDING SITE FOR RESIDUE EDO A 905
07
AC7
SOFTWARE
ALA A:177 , HOH A:1047
BINDING SITE FOR RESIDUE EDO A 906
08
AC8
SOFTWARE
SER A:68 , GLY A:70 , ASP B:41 , CYS B:42 , GLU B:179
BINDING SITE FOR RESIDUE EDO B 207
09
AC9
SOFTWARE
PHE B:65 , SER B:91 , TYR B:92 , EDO B:211
BINDING SITE FOR RESIDUE EDO B 208
10
BC1
SOFTWARE
CYS A:25 , GLY A:28 , LYS A:69
BINDING SITE FOR RESIDUE EDO A 907
11
BC2
SOFTWARE
LEU B:104 , GLY B:105 , ILE B:116 , LEU B:161
BINDING SITE FOR RESIDUE EDO B 210
12
BC3
SOFTWARE
ASN A:15 , LYS A:16 , SER A:52 , LYS B:143 , EDO B:208
BINDING SITE FOR RESIDUE EDO B 211
13
BC4
SOFTWARE
GLN A:67 , GLY A:70 , PRO A:72 , HOH A:919 , ASN B:20 , GLY B:22
BINDING SITE FOR RESIDUE EDO A 908
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: GH11_3 (B:1-189)
2: GH11_1 (B:82-92)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GH11_3
PS51761
Glycosyl hydrolases family 11 (GH11) domain profile.
XYNC_TALFU
35-223
1
B:1-189
2
GH11_1
PS00776
Glycosyl hydrolases family 11 (GH11) active site signature 1.
XYNC_TALFU
116-126
1
B:82-92
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1te1b_ (B:)
2a: SCOP_d1te1a_ (A:)
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Classes
(
)
(
)
Folds
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(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Xylanase/endoglucanase 11/12
(93)
Protein domain
:
Xylanase II
(65)
Penicillium funiculosum [TaxId: 28572]
(1)
1a
d1te1b_
B:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
(Trans)glycosidases
(1191)
Family
:
Type II chitinase
(131)
Protein domain
:
Xylanase inhibitor protein I, XIP-I
(3)
Wheat (Triticum aestivum) [TaxId: 4565]
(3)
2a
d1te1a_
A:
[
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_1te1A00 (A:1-274)
2a: CATH_1te1B00 (B:0-189)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Glycosidases
(843)
Bread wheat (Triticum aestivum)
(4)
1a
1te1A00
A:1-274
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
[code=2.60.120.180, no name defined]
(77)
Bread wheat (Triticum aestivum)
(3)
2a
1te1B00
B:0-189
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Glyco_hydro_18_1te1A01 (A:6-202)
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Clans
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)
Families
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)
(
)
Organisms
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)
(
)
Clan
:
Glyco_hydro_tim
(488)
Family
:
Glyco_hydro_18
(72)
Triticum aestivum (Wheat)
(3)
1a
Glyco_hydro_18-1te1A01
A:6-202
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Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
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set label size to 20 (allowed range: 1-58)
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show SS bonds with a radius of 100 units (=0.4Å)
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