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1T8K
Asym. Unit
Info
Asym.Unit (36 KB)
Biol.Unit 1 (31 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APO ACYL CARRIER PROTEIN FROM E. COLI
Authors
:
X. Qiu, C. A. Janson
Date
:
13 May 04 (Deposition) - 07 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Acp, Lipid Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Qiu, C. A. Janson
Structure Of Apo Acyl Carrier Protein And A Proposal To Engineer Protein Crystallization Through Metal Ions.
Acta Crystallogr. , Sect. D V. 60 1545 2004
(for further references see the
PDB file header
)
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Hetero Components
(2, 16)
Info
All Hetero Components
1a: IMIDAZOLE (IMDa)
1b: IMIDAZOLE (IMDb)
1c: IMIDAZOLE (IMDc)
1d: IMIDAZOLE (IMDd)
1e: IMIDAZOLE (IMDe)
1f: IMIDAZOLE (IMDf)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
2c: ZINC ION (ZNc)
2d: ZINC ION (ZNd)
2e: ZINC ION (ZNe)
2f: ZINC ION (ZNf)
2g: ZINC ION (ZNg)
2h: ZINC ION (ZNh)
2i: ZINC ION (ZNi)
2j: ZINC ION (ZNj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
IMD
6
Ligand/Ion
IMIDAZOLE
2
ZN
10
Ligand/Ion
ZINC ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLU A:21 , ASP A:35 , ASP A:38 , IMD A:301
BINDING SITE FOR RESIDUE ZN A 201
02
AC2
SOFTWARE
ASP A:31 , GLU A:58 , HIS A:75 , IMD A:304
BINDING SITE FOR RESIDUE ZN A 202
03
AC3
SOFTWARE
GLU A:5 , GLU A:47 , GLU A:53 , HOH A:355
BINDING SITE FOR RESIDUE ZN A 203
04
AC4
SOFTWARE
GLU A:13 , ASP A:51 , IMD A:302 , HOH A:360
BINDING SITE FOR RESIDUE ZN A 204
05
AC5
SOFTWARE
GLU A:48 , GLU A:49 , IMD A:303 , HOH A:386
BINDING SITE FOR RESIDUE ZN A 205
06
AC6
SOFTWARE
ASP A:56 , GLU A:60 , HOH A:328 , HOH A:343 , HOH A:361
BINDING SITE FOR RESIDUE ZN A 206
07
AC7
SOFTWARE
ASP A:56 , IMD A:305 , IMD A:306 , HOH A:361 , HOH A:389
BINDING SITE FOR RESIDUE ZN A 207
08
AC8
SOFTWARE
HOH A:380 , HOH A:390 , HOH A:392 , HOH A:406
BINDING SITE FOR RESIDUE ZN A 208
09
AC9
SOFTWARE
GLU A:41 , IMD A:301 , HOH A:378 , HOH A:395
BINDING SITE FOR RESIDUE ZN A 209
10
BC1
SOFTWARE
GLU A:20 , HOH A:363 , HOH A:370
BINDING SITE FOR RESIDUE ZN A 210
11
BC2
SOFTWARE
GLU A:21 , ASP A:31 , ASP A:35 , LEU A:37 , ASP A:38 , GLU A:41 , ZN A:201 , ZN A:209
BINDING SITE FOR RESIDUE IMD A 301
12
BC3
SOFTWARE
LYS A:9 , ILE A:10 , GLU A:13 , GLU A:48 , ASP A:51 , ZN A:204 , IMD A:303
BINDING SITE FOR RESIDUE IMD A 302
13
BC4
SOFTWARE
GLU A:47 , GLU A:48 , GLU A:49 , THR A:52 , GLU A:53 , ZN A:205 , IMD A:302
BINDING SITE FOR RESIDUE IMD A 303
14
BC5
SOFTWARE
ASN A:25 , ASP A:31 , PRO A:55 , GLU A:58 , TYR A:71 , HIS A:75 , ZN A:202
BINDING SITE FOR RESIDUE IMD A 304
15
BC6
SOFTWARE
GLU A:5 , VAL A:43 , GLU A:47 , ILE A:54 , ASP A:56 , ZN A:207 , IMD A:306
BINDING SITE FOR RESIDUE IMD A 305
16
BC7
SOFTWARE
LYS A:8 , GLN A:19 , VAL A:22 , ASP A:56 , ZN A:207 , IMD A:305 , HOH A:343 , HOH A:359
BINDING SITE FOR RESIDUE IMD A 306
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: CARRIER (A:1-76)
2: PHOSPHOPANTETHEINE (A:31-46)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARRIER
PS50075
Carrier protein (CP) domain profile.
ACP_ECOLI
2-77
1
A:1-76
2
PHOSPHOPANTETHEINE
PS00012
Phosphopantetheine attachment site.
ACP_ECOLI
32-47
1
A:31-46
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1t8ka_ (A:)
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Classes
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(
)
Folds
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)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Acyl carrier protein-like
(148)
Superfamily
:
ACP-like
(68)
Family
:
Acyl-carrier protein (ACP)
(40)
Protein domain
:
Acyl carrier protein
(20)
Escherichia coli [TaxId: 562]
(14)
1a
d1t8ka_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1t8kA00 (A:1-77)
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)
Organisms
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A
(155)
Homologous Superfamily
:
[code=1.10.1200.10, no name defined]
(34)
Escherichia coli. Organism_taxid: 562.
(4)
1a
1t8kA00
A:1-77
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_PP_binding_1t8kA01 (A:5-72)
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Clans
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)
(
)
Clan
:
PP-binding
(27)
Family
:
PP-binding
(27)
Escherichia coli (strain K12)
(6)
1a
PP-binding-1t8kA01
A:5-72
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Chain A
Asymmetric Unit 1
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Asym.Unit (36 KB)
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