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1T87
Asym. Unit
Info
Asym.Unit (151 KB)
Biol.Unit 1 (76 KB)
Biol.Unit 2 (74 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE FERROUS CO-BOUND CYTOCHROME P450CAM (C334A)
Authors
:
S. Nagano, T. Tosha, K. Ishimori, I. Morishima, T. L. Poulos
Date
:
11 May 04 (Deposition) - 25 May 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cytochrome P450, Oxidoreductase, Heme Enzyme
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Nagano, T. Tosha, K. Ishimori, I. Morishima, T. L. Poulos
Crystal Structure Of The Cytochrome P450Cam Mutant That Exhibits The Same Spectral Perturbations Induced By Putidaredoxin Binding.
J. Biol. Chem. V. 279 42844 2004
(for further references see the
PDB file header
)
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Hetero Components
(5, 9)
Info
All Hetero Components
1a: CAMPHOR (CAMa)
1b: CAMPHOR (CAMb)
2a: CARBON MONOXIDE (CMOa)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4a: POTASSIUM ION (Ka)
4b: POTASSIUM ION (Kb)
4c: POTASSIUM ION (Kc)
5a: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,... (TRSa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CAM
2
Ligand/Ion
CAMPHOR
2
CMO
1
Ligand/Ion
CARBON MONOXIDE
3
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
4
K
3
Ligand/Ion
POTASSIUM ION
5
TRS
1
Ligand/Ion
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLU A:84 , GLY A:93 , GLU A:94 , TYR A:96 , HOH A:1943
BINDING SITE FOR RESIDUE K A 1515
2
AC2
SOFTWARE
PRO A:15 , PRO A:16 , VAL A:18 , GLU A:20 , HOH A:2037 , THR B:217
BINDING SITE FOR RESIDUE K A 1715
3
AC3
SOFTWARE
GLU B:84 , GLY B:93 , GLU B:94 , TYR B:96
BINDING SITE FOR RESIDUE K B 2515
4
AC4
SOFTWARE
PRO A:100 , THR A:101 , GLN A:108 , ARG A:112 , LEU A:245 , GLY A:248 , GLY A:249 , THR A:252 , ASP A:297 , ARG A:299 , GLN A:322 , THR A:349 , PHE A:350 , GLY A:351 , HIS A:355 , CYS A:357 , GLY A:359 , HOH A:1728 , HOH A:1740
BINDING SITE FOR RESIDUE HEM A 1417
5
AC5
SOFTWARE
PRO B:100 , THR B:101 , GLN B:108 , ARG B:112 , LEU B:245 , GLY B:248 , GLY B:249 , THR B:252 , ASP B:297 , ARG B:299 , GLN B:322 , THR B:349 , PHE B:350 , GLY B:351 , HIS B:355 , CYS B:357 , GLY B:359 , CMO B:2420 , HOH B:2548 , HOH B:2594
BINDING SITE FOR RESIDUE HEM B 2417
6
AC6
SOFTWARE
GLY B:248 , THR B:252 , HEM B:2417 , CAM B:2422
BINDING SITE FOR RESIDUE CMO B 2420
7
AC7
SOFTWARE
PHE A:87 , TYR A:96 , VAL A:295
BINDING SITE FOR RESIDUE CAM A 1422
8
AC8
SOFTWARE
PHE B:87 , TYR B:96 , THR B:101 , LEU B:244 , VAL B:247 , VAL B:295 , ILE B:395 , CMO B:2420
BINDING SITE FOR RESIDUE CAM B 2422
9
AC9
SOFTWARE
GLU A:107 , HOH A:1739 , PRO B:268 , ARG B:271 , GLN B:272 , ILE B:275 , PRO B:379 , ASP B:380 , HOH B:2555
BINDING SITE FOR RESIDUE TRS B 2430
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (A:350-359,B:350-359)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CPXA_PSEPU
351-360
2
A:350-359
B:350-359
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1t87a_ (A:)
1b: SCOP_d1t87b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
Cytochrome P450
(323)
Protein domain
:
Cytochrome P450-CAM
(108)
Pseudomonas putida [TaxId: 303]
(108)
1a
d1t87a_
A:
1b
d1t87b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1t87A00 (A:8-414)
1b: CATH_1t87B00 (B:10-414)
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Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Cytochrome p450
(271)
Homologous Superfamily
:
Cytochrome p450
(271)
Pseudomonas putida. Organism_taxid: 303.
(36)
1a
1t87A00
A:8-414
1b
1t87B00
B:10-414
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (151 KB)
Header - Asym.Unit
Biol.Unit 1 (76 KB)
Header - Biol.Unit 1
Biol.Unit 2 (74 KB)
Header - Biol.Unit 2
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