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1T5E
Asym. Unit
Info
Asym.Unit (482 KB)
Biol.Unit 1 (468 KB)
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(1)
Title
:
THE STRUCTURE OF MEXA
Authors
:
M. K. Higgins, E. Bokma, E. Koronakis, C. Hughes, V. Koronakis
Date
:
04 May 04 (Deposition) - 18 May 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M (1x)
Keywords
:
Mexa, Antibiotic Efflux Pump, Periplasmic Adaptor Protein, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. K. Higgins, E. Bokma, E. Koronakis, C. Hughes, V. Koronakis
Structure Of The Periplasmic Component Of A Bacterial Drug Efflux Pump
Proc. Natl. Acad. Sci. Usa V. 101 9994 2004
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Hetero Components
(2, 13)
Info
All Hetero Components
1a: GLYCERALDEHYDE (3GRa)
1b: GLYCERALDEHYDE (3GRb)
1c: GLYCERALDEHYDE (3GRc)
1d: GLYCERALDEHYDE (3GRd)
1e: GLYCERALDEHYDE (3GRe)
1f: GLYCERALDEHYDE (3GRf)
1g: GLYCERALDEHYDE (3GRg)
1h: GLYCERALDEHYDE (3GRh)
1i: GLYCERALDEHYDE (3GRi)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3GR
9
Ligand/Ion
GLYCERALDEHYDE
2
GOL
4
Ligand/Ion
GLYCEROL
[
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY C:146 , ARG C:147 , VAL D:227 , SER D:228
BINDING SITE FOR RESIDUE 3GR C 361
02
AC2
SOFTWARE
GLY D:146 , ARG D:147 , THR D:166
BINDING SITE FOR RESIDUE 3GR D 361
03
AC3
SOFTWARE
GLY E:146 , ARG E:147 , VAL F:227 , SER F:228
BINDING SITE FOR RESIDUE 3GR E 361
04
AC4
SOFTWARE
GLY F:146 , ARG F:147
BINDING SITE FOR RESIDUE 3GR F 361
05
AC5
SOFTWARE
GLY G:146 , ARG G:147 , THR G:166
BINDING SITE FOR RESIDUE 3GR G 361
06
AC6
SOFTWARE
VAL G:227 , SER G:228 , GLY H:146 , ARG H:147
BINDING SITE FOR RESIDUE 3GR H 361
07
AC7
SOFTWARE
VAL H:227 , SER H:228 , GLY I:146 , ARG I:147
BINDING SITE FOR RESIDUE 3GR I 361
08
AC8
SOFTWARE
GLY K:146 , ARG K:147
BINDING SITE FOR RESIDUE 3GR K 361
09
AC9
SOFTWARE
VAL K:227 , GLY L:146 , ARG L:147
BINDING SITE FOR RESIDUE 3GR L 361
10
BC1
SOFTWARE
ARG A:147 , VAL B:227 , SER B:228
BINDING SITE FOR RESIDUE GOL A 361
11
BC2
SOFTWARE
GLY B:146 , ARG B:147
BINDING SITE FOR RESIDUE GOL B 361
12
BC3
SOFTWARE
VAL I:227 , SER I:228 , GLY J:146 , ARG J:147
BINDING SITE FOR RESIDUE GOL J 361
13
BC4
SOFTWARE
VAL L:227 , SER L:228 , GLY M:146 , ARG M:147
BINDING SITE FOR RESIDUE GOL M 361
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 13)
Info
All SCOP Domains
1a: SCOP_d1t5ea_ (A:)
1b: SCOP_d1t5eb_ (B:)
1c: SCOP_d1t5ec_ (C:)
1d: SCOP_d1t5ed_ (D:)
1e: SCOP_d1t5ee_ (E:)
1f: SCOP_d1t5ef_ (F:)
1g: SCOP_d1t5eg_ (G:)
1h: SCOP_d1t5eh_ (H:)
1i: SCOP_d1t5ei_ (I:)
1j: SCOP_d1t5ej_ (J:)
1k: SCOP_d1t5ek_ (K:)
1l: SCOP_d1t5el_ (L:)
1m: SCOP_d1t5em_ (M:)
View:
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Classes
(
)
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)
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)
(
)
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)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
HlyD-like secretion proteins
(3)
Superfamily
:
HlyD-like secretion proteins
(3)
Family
:
HlyD-like secretion proteins
(2)
Protein domain
:
Multidrug resistance protein MexA domain
(2)
Pseudomonas aeruginosa [TaxId: 287]
(2)
1a
d1t5ea_
A:
1b
d1t5eb_
B:
1c
d1t5ec_
C:
1d
d1t5ed_
D:
1e
d1t5ee_
E:
1f
d1t5ef_
F:
1g
d1t5eg_
G:
1h
d1t5eh_
H:
1i
d1t5ei_
I:
1j
d1t5ej_
J:
1k
d1t5ek_
K:
1l
d1t5el_
L:
1m
d1t5em_
M:
[
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 13)
Info
all PFAM domains
1a: PFAM_HlyD_1t5eM01 (M:39-259)
1b: PFAM_HlyD_1t5eM02 (M:39-259)
1c: PFAM_HlyD_1t5eM03 (M:39-259)
1d: PFAM_HlyD_1t5eM04 (M:39-259)
1e: PFAM_HlyD_1t5eM05 (M:39-259)
1f: PFAM_HlyD_1t5eM06 (M:39-259)
1g: PFAM_HlyD_1t5eM07 (M:39-259)
1h: PFAM_HlyD_1t5eM08 (M:39-259)
1i: PFAM_HlyD_1t5eM09 (M:39-259)
1j: PFAM_HlyD_1t5eM10 (M:39-259)
1k: PFAM_HlyD_1t5eM11 (M:39-259)
1l: PFAM_HlyD_1t5eM12 (M:39-259)
1m: PFAM_HlyD_1t5eM13 (M:39-259)
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)
Organisms
(
)
(
)
Clan
:
Hybrid
(58)
Family
:
HlyD
(3)
Pseudomonas aeruginosa
(3)
1a
HlyD-1t5eM01
M:39-259
1b
HlyD-1t5eM02
M:39-259
1c
HlyD-1t5eM03
M:39-259
1d
HlyD-1t5eM04
M:39-259
1e
HlyD-1t5eM05
M:39-259
1f
HlyD-1t5eM06
M:39-259
1g
HlyD-1t5eM07
M:39-259
1h
HlyD-1t5eM08
M:39-259
1i
HlyD-1t5eM09
M:39-259
1j
HlyD-1t5eM10
M:39-259
1k
HlyD-1t5eM11
M:39-259
1l
HlyD-1t5eM12
M:39-259
1m
HlyD-1t5eM13
M:39-259
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Asym.Unit (482 KB)
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