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1T2X
Asym. Unit
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Asym.Unit (110 KB)
Biol.Unit 1 (105 KB)
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(1)
Title
:
GLACTOSE OXIDASE C383S MUTANT IDENTIFIED BY DIRECTED EVOLUTION
Authors
:
D. Wilkinson, N. Akumanyi, R. Hurtado-Guerrero, H. Dawkes, P. F. Knowles, S. E. V. Phillips, M. J. Mcpherson
Date
:
23 Apr 04 (Deposition) - 18 May 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
7 Blade Beta Propeller, C383S Mutant Form, Mutant Form Of Copper Containing Enzyme, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Wilkinson, N. Akumanyi, R. Hurtado-Guerrero, H. Dawkes, P. F. Knowles, S. E. V. Phillips, M. J. Mcpherson
Structural And Kinetic Studies Of A Series Of Mutants Of Galactose Oxidase Identified By Directed Evolution.
Protein Eng. Des. Sel. V. 17 141 2004
(for further references see the
PDB file header
)
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
2a: COPPER (II) ION (CUa)
3a: SODIUM ION (NAa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
3
Ligand/Ion
ACETATE ION
2
CU
1
Ligand/Ion
COPPER (II) ION
3
NA
1
Ligand/Ion
SODIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:29 , ASP A:32 , ASN A:34 , THR A:37 , ALA A:141 , GLU A:142
BINDING SITE FOR RESIDUE NA A 640
2
AC2
SOFTWARE
PHE A:227 , CYS A:228 , TYR A:272 , TYR A:495 , HIS A:496 , HIS A:581
BINDING SITE FOR RESIDUE CU A 641
3
AC3
SOFTWARE
ARG A:371 , ALA A:378 , ALA A:381 , THR A:398 , GLY A:400 , ASN A:413 , HIS A:415
BINDING SITE FOR RESIDUE ACT A 642
4
AC4
SOFTWARE
TYR A:272 , GLN A:326 , ARG A:330 , TYR A:495 , HOH A:956
BINDING SITE FOR RESIDUE ACT A 643
5
AC5
SOFTWARE
GLN A:605 , SER A:608 , HOH A:727
BINDING SITE FOR RESIDUE ACT A 644
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 3)
Info
All SCOP Domains
1a: SCOP_d1t2xa3 (A:151-537)
2a: SCOP_d1t2xa2 (A:1-150)
3a: SCOP_d1t2xa1 (A:538-639)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
Galactose oxidase, central domain
(13)
Family
:
Galactose oxidase, central domain
(13)
Protein domain
:
Galactose oxidase, central domain
(11)
Dactylium dendroides [TaxId: 5132]
(4)
1a
d1t2xa3
A:151-537
Fold
:
Galactose-binding domain-like
(314)
Superfamily
:
Galactose-binding domain-like
(314)
Family
:
Galactose-binding domain
(15)
Protein domain
:
Galactose oxidase, N-terminal domain
(11)
Fungus (Fusarium sp.) [TaxId: 29916]
(2)
2a
d1t2xa2
A:1-150
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
E-set domains of sugar-utilizing enzymes
(147)
Protein domain
:
Galactose oxidase, C-terminal domain
(11)
Fungus (Fusarium sp.) [TaxId: 29916]
(2)
3a
d1t2xa1
A:538-639
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CATH Domains
(3, 3)
Info
all CATH domains
1a: CATH_1t2xA02 (A:154-541)
2a: CATH_1t2xA03 (A:542-639)
3a: CATH_1t2xA01 (A:1-153)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
7 Propellor
(136)
Topology
:
Methylamine Dehydrogenase; Chain H
(136)
Homologous Superfamily
:
Galactose oxidase, central domain
(13)
Fusarium sp.. Organism_taxid: 29916.
(1)
1a
1t2xA02
A:154-541
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Immunoglobulins
(2282)
Fusarium sp.. Organism_taxid: 29916.
(1)
2a
1t2xA03
A:542-639
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Galactose-binding domain-like
(195)
Fusarium sp.. Organism_taxid: 29916.
(1)
3a
1t2xA01
A:1-153
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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Asym.Unit (110 KB)
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