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1T1V
Asym. Unit
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Asym.Unit (38 KB)
Biol.Unit 1 (34 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE GLUTAREDOXIN-LIKE PROTEIN SH3BGRL3 AT 1.6 A RESOLUTION
Authors
:
M. Nardini, M. Mazzocco, M. Massaro, M. Maffei, A. Vergano, A. Donadini M. Scartezzini, M. Bolognesi
Date
:
19 Apr 04 (Deposition) - 29 Jun 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Glutaredoxin; Thioredoxin Fold; Protein 3D-Structure; X-Ray Crystallography, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Nardini, M. Mazzocco, M. Massaro, M. Maffei, A. Vergano, A. Donadini, M. Scartezzini, M. Bolognesi
Crystal Structure Of The Glutaredoxin-Like Protein Sh3Bgrl3 At 1. 6 A Resolution
Biochem. Biophys. Res. Commun. V. 318 470 2004
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Hetero Components
(3, 4)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
2a: GLYCEROL (GOLa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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Label:
No.
Name
Count
Type
Full Name
1
ACY
1
Ligand/Ion
ACETIC ACID
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR B:12 , GLY B:13
BINDING SITE FOR RESIDUE SO4 B 1001
2
AC2
SOFTWARE
SER B:14 , ARG B:15 , GLU B:16 , ARG B:32 , HOH B:2018 , HOH B:2046 , HOH B:2079
BINDING SITE FOR RESIDUE SO4 B 1002
3
AC3
SOFTWARE
TYR B:35 , GLN B:36 , HOH B:2023
BINDING SITE FOR RESIDUE ACY B 2001
4
AC4
SOFTWARE
ARG A:15 , LYS A:31 , ASP A:84 , LEU A:86 , GLN A:87 , ARG B:15
BINDING SITE FOR RESIDUE GOL A 3001
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: GLUTAREDOXIN_2 (A:1-93,B:1-93)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLUTAREDOXIN_2
PS51354
Glutaredoxin domain profile.
SH3L3_MOUSE
1-93
2
A:1-93
B:1-93
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1t1va_ (A:)
1b: SCOP_d1t1vb_ (B:)
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Protein Domains
(
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
SH3BGR (SH3-binding, glutamic acid-rich protein-like)
(3)
Protein domain
:
SH3BGRL3
(2)
Mouse (Mus musculus) [TaxId: 10090]
(2)
1a
d1t1va_
A:
1b
d1t1vb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1t1vA00 (A:1-93)
1b: CATH_1t1vB00 (B:1-93)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Glutaredoxin
(620)
Homologous Superfamily
:
Glutaredoxin
(617)
House mouse (Mus musculus)
(21)
1a
1t1vA00
A:1-93
1b
1t1vB00
B:1-93
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_SH3BGR_1t1vB01 (B:2-93)
1b: PFAM_SH3BGR_1t1vB02 (B:2-93)
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)
Clan
:
Thioredoxin
(367)
Family
:
SH3BGR
(4)
Mus musculus (Mouse)
(1)
1a
SH3BGR-1t1vB01
B:2-93
1b
SH3BGR-1t1vB02
B:2-93
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Asym.Unit (38 KB)
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