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1T1N
Asym. Unit
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Asym.Unit (54 KB)
Biol.Unit 1 (49 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CARBONMONOXY HEMOGLOBIN
Authors
:
L. Mazzarella, L. Vitagliano, C. Savino, A. Zagari
Date
:
05 Mar 99 (Deposition) - 29 Apr 99 (Release) - 07 Nov 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Oxygen Transport, Hemoglobin
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
L. Mazzarella, R. D'Avino, G. Di Prisco, C. Savino, L. Vitagliano, P. C. E. Moody, A. Zagari
Crystal Structure Of Trematomus Newnesi Haemoglobin Re-Open The Root Effect Question.
J. Mol. Biol. V. 287 897 1999
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
2a: CARBON MONOXIDE (CMOa)
2b: CARBON MONOXIDE (CMOb)
3a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
3b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
2
CMO
2
Ligand/Ion
CARBON MONOXIDE
3
HEM
2
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: STA (AUTHOR)
6: STB (AUTHOR)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:42 , PHE A:43 , HIS A:45 , TRP A:46 , HIS A:59 , LYS A:62 , GLN A:87 , HIS A:88 , LEU A:92 , ASN A:98 , LEU A:102 , LEU A:137 , CMO A:144
BINDING SITE FOR RESIDUE HEM A 143
2
AC2
SOFTWARE
HIS A:59 , VAL A:63 , HEM A:143
BINDING SITE FOR RESIDUE CMO A 144
3
AC3
SOFTWARE
TYR B:41 , PHE B:42 , HIS B:63 , LYS B:66 , HIS B:92 , LEU B:96 , VAL B:98 , ASN B:102 , PHE B:103 , LEU B:106 , LEU B:141 , CMO B:148
BINDING SITE FOR RESIDUE HEM B 147
4
AC4
SOFTWARE
HIS B:63 , VAL B:67 , HEM B:147
BINDING SITE FOR RESIDUE CMO B 148
5
STA
AUTHOR
HIS A:88 , HEM A:143
HEME GROUPS ARE BOUND TO CO
6
STB
AUTHOR
HIS B:92 , HEM B:147
HEME GROUPS ARE BOUND TO CO
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: GLOBIN (A:2-142,B:4-146)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLOBIN
PS01033
Globin family profile.
HBA1_TRENE
2-142
1
A:2-142
HBB_TRENE
4-146
1
B:4-146
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d1t1na_ (A:)
2a: SCOP_d1t1nb_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Globins
(1157)
Protein domain
:
Hemoglobin, alpha-chain
(292)
Antarctic fish (Trematomus newnesi) [TaxId: 35730]
(6)
1a
d1t1na_
A:
Protein domain
:
Hemoglobin, beta-chain
(292)
Antarctic fish (Trematomus newnesi) [TaxId: 35730]
(6)
2a
d1t1nb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1t1nB00 (B:1-146)
1b: CATH_1t1nA00 (A:1-142)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Globin-like
(786)
Homologous Superfamily
:
Globins
(743)
Dusky notothen (Trematomus newnesi)
(3)
1a
1t1nB00
B:1-146
1b
1t1nA00
A:1-142
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Globin_1t1nA01 (A:6-107)
1b: PFAM_Globin_1t1nB01 (B:7-111)
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Clans
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(
)
Organisms
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)
(
)
Clan
:
Globin
(291)
Family
:
Globin
(264)
Trematomus newnesi (Dusky notothen)
(4)
1a
Globin-1t1nA01
A:6-107
1b
Globin-1t1nB01
B:7-111
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Asymmetric Unit 1
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