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1T11
Biol. Unit 2
Info
Asym.Unit (126 KB)
Biol.Unit 1 (120 KB)
Biol.Unit 2 (238 KB)
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(1)
Title
:
TRIGGER FACTOR
Authors
:
A. V. Ludlam, B. A. Moore, Z. Xu
Date
:
14 Apr 04 (Deposition) - 21 Sep 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A,B (2x)
Keywords
:
Helix-Turn-Helix, Four-Helix-Bundle, Ppiase, Chaperone
(Keyword Search:
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]
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Reference
:
A. V. Ludlam, B. A. Moore, Z. Xu
The Crystal Structure Of Ribosomal Chaperone Trigger Factor From Vibrio Cholerae.
Proc. Natl. Acad. Sci. Usa V. 101 13436 2004
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: FKBP_PPIASE (A:161-246,B:161-246)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
FKBP_PPIASE
PS50059
FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.
TIG_VIBCH
161-246
4
A:161-246
B:161-246
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(3, 6)
Info
All SCOP Domains
1a: SCOP_d1t11a1 (A:248-376)
1b: SCOP_d1t11b1 (B:248-376)
2a: SCOP_d1t11a3 (A:135-247)
2b: SCOP_d1t11b3 (B:135-247)
3a: SCOP_d1t11a2 (A:1-129)
3b: SCOP_d1t11b2 (B:1-129)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Triger factor/SurA peptide-binding domain-like
(5)
Superfamily
:
Triger factor/SurA peptide-binding domain-like
(5)
Family
:
TF C-terminus
(3)
Protein domain
:
Trigger factor, C-terminal domain
(3)
Vibrio cholerae [TaxId: 666]
(1)
1a
d1t11a1
A:248-376
1b
d1t11b1
B:248-376
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
FKBP-like
(309)
Superfamily
:
FKBP-like
(198)
Family
:
FKBP immunophilin/proline isomerase
(153)
Protein domain
:
Trigger factor PPIase domain
(5)
Vibrio cholerae [TaxId: 666]
(1)
2a
d1t11a3
A:135-247
2b
d1t11b3
B:135-247
Fold
:
Ribosome binding domain-like
(8)
Superfamily
:
Trigger factor ribosome-binding domain
(5)
Family
:
Trigger factor ribosome-binding domain
(5)
Protein domain
:
Trigger factor ribosome-binding domain
(5)
Vibrio cholerae [TaxId: 666]
(1)
3a
d1t11a2
A:1-129
3b
d1t11b2
B:1-129
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_1t11A01 (A:0-112)
1b: CATH_1t11B01 (B:0-112)
2a: CATH_1t11A03 (A:150-246)
2b: CATH_1t11B03 (B:150-246)
3a: CATH_1t11A02 (A:113-149,A:247-378)
3b: CATH_1t11B02 (B:113-149,B:247-377)
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)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
Trigger factor ribosome binding domain; domain 1
(4)
Vibrio cholerae. Organism_taxid: 666.
(1)
1a
1t11A01
A:0-112
1b
1t11B01
B:0-112
Architecture
:
Roll
(3276)
Topology
:
Chitinase A; domain 3
(225)
Homologous Superfamily
:
[code=3.10.50.40, no name defined]
(98)
Vibrio cholerae. Organism_taxid: 666.
(1)
2a
1t11A03
A:150-246
2b
1t11B03
B:150-246
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Trigger factor, domain 2
(1)
Homologous Superfamily
:
Trigger factor, domain 2
(1)
Vibrio cholerae. Organism_taxid: 666.
(1)
3a
1t11A02
A:113-149,A:247-378
3b
1t11B02
B:113-149,B:247-377
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Trigger_C_1t11B01 (B:262-377)
1b: PFAM_Trigger_C_1t11B02 (B:262-377)
2a: PFAM_FKBP_C_1t11B03 (B:154-238)
2b: PFAM_FKBP_C_1t11B04 (B:154-238)
3a: PFAM_Trigger_N_1t11B05 (B:1-145)
3b: PFAM_Trigger_N_1t11B06 (B:1-145)
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)
Clan
:
Trigger_C
(7)
Family
:
Trigger_C
(3)
Vibrio cholerae
(1)
1a
Trigger_C-1t11B01
B:262-377
1b
Trigger_C-1t11B02
B:262-377
Clan
:
no clan defined [family: FKBP_C]
(58)
Family
:
FKBP_C
(58)
Vibrio cholerae
(1)
2a
FKBP_C-1t11B03
B:154-238
2b
FKBP_C-1t11B04
B:154-238
Clan
:
no clan defined [family: Trigger_N]
(4)
Family
:
Trigger_N
(4)
Vibrio cholerae
(1)
3a
Trigger_N-1t11B05
B:1-145
3b
Trigger_N-1t11B06
B:1-145
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Asym.Unit (126 KB)
Header - Asym.Unit
Biol.Unit 1 (120 KB)
Header - Biol.Unit 1
Biol.Unit 2 (238 KB)
Header - Biol.Unit 2
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