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1SZO
Asym. Unit
Info
Asym.Unit (512 KB)
Biol.Unit 1 (135 KB)
Biol.Unit 2 (132 KB)
Biol.Unit 3 (131 KB)
Biol.Unit 4 (130 KB)
Biol.Unit 5 (253 KB)
Biol.Unit 6 (259 KB)
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(1)
Title
:
CRYSTAL STRUCTURE ANALYSIS OF THE 6-OXO CAMPHOR HYDROLASE HIS122ALA MUTANT BOUND TO ITS NATURAL PRODUCT (2S,4S)-ALPHA-CAMPHOLINIC ACID
Authors
:
P. M. Leonard, G. Grogan
Date
:
06 Apr 04 (Deposition) - 29 Jun 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Biol. Unit 3: G,H,I (1x)
Biol. Unit 4: J,K,L (1x)
Biol. Unit 5: G,H,I,J,K,L (1x)
Biol. Unit 6: A,B,C,D,E,F (1x)
Keywords
:
Enzyme-Product Complex, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. M. Leonard, G. Grogan
Structure Of 6-Oxo Camphor Hydrolase H122A Mutant Bound To Its Natural Product, (2S, 4S)-Alpha-Campholinic Acid: Mutant Structure Suggests An Atypical Mode Of Transition State Binding For A Crotonase Homolog.
J. Biol. Chem. V. 279 31312 2004
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(2, 16)
Info
All Hetero Components
2a: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXa)
2b: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXb)
2c: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXc)
2d: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXd)
2e: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXe)
2f: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXf)
2g: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXg)
2h: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXh)
2i: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXi)
2j: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXj)
2k: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXk)
2l: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3... (CAXl)
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
CAX
12
Ligand/Ion
(2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3,3-TRIMETHYLCYCLOPENTANONE
[
close Hetero Component info
]
Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HOH A:5058 , HOH A:5059 , ASP B:186 , HOH B:5092 , HOH B:5108 , HOH C:5039 , HOH C:5077
BINDING SITE FOR RESIDUE CA B 2001
02
AC2
SOFTWARE
HOH D:5090 , HOH E:5022 , HOH E:5074 , HOH E:5152 , ASP F:186 , HOH F:5112 , HOH F:5132
BINDING SITE FOR RESIDUE CA F 2002
03
AC3
SOFTWARE
HOH G:5045 , HOH G:5129 , HOH H:5116 , HOH I:5057 , HOH I:5066 , HOH I:5069
BINDING SITE FOR RESIDUE CA I 2003
04
AC4
SOFTWARE
HOH J:5051 , HOH J:5102 , HOH J:5111 , HOH K:5065 , HOH K:5066 , HOH L:5143
BINDING SITE FOR RESIDUE CA K 2004
05
AC5
SOFTWARE
TRP A:40 , HIS A:45 , ILE A:77 , PHE A:82 , ILE A:93 , HIS A:145 , ASP A:154 , GLU A:244 , HOH A:5007
BINDING SITE FOR RESIDUE CAX A 5001
06
AC6
SOFTWARE
TRP B:40 , HIS B:45 , ILE B:77 , PHE B:82 , HIS B:145 , ASP B:154 , GLU B:244 , HOH B:5032
BINDING SITE FOR RESIDUE CAX B 5002
07
AC7
SOFTWARE
TRP C:40 , HIS C:45 , ILE C:77 , PHE C:82 , ILE C:93 , HIS C:145 , ASP C:154 , GLU C:244 , HOH C:5034
BINDING SITE FOR RESIDUE CAX C 5003
08
AC8
SOFTWARE
TRP D:40 , HIS D:45 , ILE D:77 , PHE D:82 , ILE D:93 , HIS D:145 , ASP D:154 , GLU D:244 , HOH D:5021
BINDING SITE FOR RESIDUE CAX D 5004
09
AC9
SOFTWARE
TRP E:40 , HIS E:45 , ILE E:77 , PHE E:82 , ILE E:93 , HIS E:145 , ASP E:154 , GLU E:244 , HOH E:5036
BINDING SITE FOR RESIDUE CAX E 5005
10
BC1
SOFTWARE
TRP F:40 , HIS F:45 , ILE F:77 , PHE F:82 , ILE F:93 , HIS F:145 , ASP F:154 , GLU F:244 , HOH F:5034 , HOH F:5087
BINDING SITE FOR RESIDUE CAX F 5006
11
BC2
SOFTWARE
TRP G:40 , HIS G:45 , ILE G:77 , PHE G:82 , ILE G:93 , HIS G:145 , ASP G:154 , GLU G:244 , HOH G:5052
BINDING SITE FOR RESIDUE CAX G 5007
12
BC3
SOFTWARE
TRP H:40 , HIS H:45 , ILE H:77 , PHE H:82 , ILE H:93 , HIS H:145 , ASP H:154 , GLU H:244 , HOH H:5026 , HOH H:5035
BINDING SITE FOR RESIDUE CAX H 5008
13
BC4
SOFTWARE
TRP I:40 , HIS I:45 , ILE I:77 , PHE I:82 , ILE I:93 , HIS I:145 , ASP I:154 , GLU I:244 , HOH I:5027
BINDING SITE FOR RESIDUE CAX I 5009
14
BC5
SOFTWARE
TRP J:40 , HIS J:45 , ILE J:77 , PHE J:82 , ILE J:93 , HIS J:145 , ASP J:154 , GLU J:244 , HOH J:5024
BINDING SITE FOR RESIDUE CAX J 5010
15
BC6
SOFTWARE
TRP K:40 , HIS K:45 , ILE K:77 , PHE K:82 , ILE K:93 , HIS K:145 , ASP K:154 , GLU K:244 , HOH K:5044
BINDING SITE FOR RESIDUE CAX K 5011
16
BC7
SOFTWARE
TRP L:40 , HIS L:45 , ILE L:77 , PHE L:82 , ILE L:93 , HIS L:145 , ASP L:154 , GLU L:244 , HOH L:5066
BINDING SITE FOR RESIDUE CAX L 5012
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d1szoa_ (A:)
1b: SCOP_d1szob_ (B:)
1c: SCOP_d1szok_ (K:)
1d: SCOP_d1szol_ (L:)
1e: SCOP_d1szoc_ (C:)
1f: SCOP_d1szod_ (D:)
1g: SCOP_d1szoe_ (E:)
1h: SCOP_d1szof_ (F:)
1i: SCOP_d1szog_ (G:)
1j: SCOP_d1szoh_ (H:)
1k: SCOP_d1szoi_ (I:)
1l: SCOP_d1szoj_ (J:)
View:
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Classes
(
)
(
)
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(
)
(
)
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(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
Crotonase-like
(39)
Protein domain
:
6-oxo camphor hydrolase
(2)
Rhodococcus erythropolis [TaxId: 1833]
(2)
1a
d1szoa_
A:
1b
d1szob_
B:
1c
d1szok_
K:
1d
d1szol_
L:
1e
d1szoc_
C:
1f
d1szod_
D:
1g
d1szoe_
E:
1h
d1szof_
F:
1i
d1szog_
G:
1j
d1szoh_
H:
1k
d1szoi_
I:
1l
d1szoj_
J:
[
close SCOP info
]
CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_1szoB00 (B:4-251)
1b: CATH_1szoC00 (C:4-251)
1c: CATH_1szoK00 (K:4-252)
1d: CATH_1szoD00 (D:2-252)
1e: CATH_1szoE00 (E:4-251)
1f: CATH_1szoF00 (F:5-252)
1g: CATH_1szoH00 (H:4-251)
1h: CATH_1szoL00 (L:5-252)
1i: CATH_1szoA00 (A:4-252)
1j: CATH_1szoG00 (G:4-252)
1k: CATH_1szoI00 (I:4-252)
1l: CATH_1szoJ00 (J:4-252)
View:
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)
(
)
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)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Homologous Superfamily
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Ncimb 9784 (Rhodococcus sp)
(1)
1a
1szoB00
B:4-251
1b
1szoC00
C:4-251
1c
1szoK00
K:4-252
1d
1szoD00
D:2-252
1e
1szoE00
E:4-251
1f
1szoF00
F:5-252
1g
1szoH00
H:4-251
1h
1szoL00
L:5-252
1i
1szoA00
A:4-252
1j
1szoG00
G:4-252
1k
1szoI00
I:4-252
1l
1szoJ00
J:4-252
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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