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1SZA
Asym. Unit
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Asym.Unit (77 KB)
Biol.Unit 1 (26 KB)
Biol.Unit 2 (26 KB)
Biol.Unit 3 (25 KB)
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(1)
Title
:
THE RNA POLYMERASE II CTD IN MRNA PROCESSING: BETA-TURN RECOGNITION AND BETA-SPIRAL MODEL
Authors
:
A. Meinhart, P. Cramer
Date
:
05 Apr 04 (Deposition) - 13 Jul 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,Z
Biol. Unit 1: A (1x)
Biol. Unit 2: B,Z (1x)
Biol. Unit 3: C (1x)
Keywords
:
Pcf11, Rna Polymerase Ii Ctd Interacting Domain, Arm Repeats, Phosphoserine, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Meinhart, P. Cramer
Recognition Of Rna Polymerase Ii Carboxy-Terminal Domain By 3'-Rna-Processing Factors.
Nature V. 430 223 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: PHOSPHOSERINE (SEPa)
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No.
Name
Count
Type
Full Name
1
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
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Sites
(0, 0)
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PROSITE Patterns/Profiles
(1, 3)
Info
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1: CID (A:4-139,B:4-139,C:4-139)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CID
PS51391
CID domain profile.
PCF11_YEAST
4-139
3
A:4-139
B:4-139
C:4-139
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Exons
(1, 3)
Info
All Exons
Exon 1.1 (A:1-144 | B:4-143 | C:2-141)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YDR228C
1
YDR228C.1
IV:923803-921923
1881
PCF11_YEAST
1-626
626
3
A:1-144
B:4-143
C:2-141
144
140
140
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d1szaa_ (A:)
1b: SCOP_d1szab_ (B:)
1c: SCOP_d1szac_ (C:)
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(
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
ENTH/VHS domain
(36)
Family
:
RPR domain (SMART 00582 )
(3)
Protein domain
:
PCF11 protein
(2)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(2)
1a
d1szaa_
A:
1b
d1szab_
B:
1c
d1szac_
C:
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1szaB00 (B:4-143)
1b: CATH_1szaC00 (C:2-141)
1c: CATH_1szaA00 (A:1-144)
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Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.90, no name defined]
(33)
Baker's yeast (Saccharomyces cerevisiae)
(2)
1a
1szaB00
B:4-143
1b
1szaC00
C:2-141
1c
1szaA00
A:1-144
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (77 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
Biol.Unit 2 (26 KB)
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Biol.Unit 3 (25 KB)
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