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1SXG
Biol. Unit 1
Info
Asym.Unit (265 KB)
Biol.Unit 1 (90 KB)
Biol.Unit 2 (90 KB)
Biol.Unit 3 (89 KB)
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(1)
Title
:
STRUCTURAL STUDIES ON THE APO TRANSCRIPTION FACTOR FORM B. MEGATERIUM
Authors
:
M. A. Schumacher, G. S. Allen, M. Diel, G. Seidel, W. Hillen, R. G. Brennan
Date
:
30 Mar 04 (Deposition) - 19 Oct 04 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B,D,F,I,P
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,I (1x)
Biol. Unit 3: F,P (1x)
Keywords
:
Allosterism; Phosphoprotein; Transcription Regulation
(Keyword Search:
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Reference
:
M. A. Schumacher, G. S. Allen, M. Diel, G. Seidel, W. Hillen, R. G. Brennan
Structural Studies On The Apo Transcription Factor Form B. Megaterium
Cell(Cambridge, Mass. ) V. 118 731 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-PHENYLAMINO-ETHANESULFONIC ACID (171a)
1b: 2-PHENYLAMINO-ETHANESULFONIC ACID (171b)
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No.
Name
Count
Type
Full Name
1
171
1
Ligand/Ion
2-PHENYLAMINO-ETHANESULFONIC ACID
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Sites
(2, 2)
Info
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:85 , MET A:88 , ARG I:303 , LYS I:307 , VAL I:314 , ASP I:315 , SER I:316
BINDING SITE FOR RESIDUE 171 A 3256
2
AC2
SOFTWARE
TYR B:295 , ARG B:303 , ILE D:85 , ASP D:296 , ALA D:299 , VAL D:300 , ARG D:303
BINDING SITE FOR RESIDUE 171 B 5256
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d1sxga_ (A:)
1b: SCOP_d1sxgb_ (B:)
1c: SCOP_d1sxgd_ (D:)
1d: SCOP_d1sxgf_ (F:)
1e: SCOP_d1sxgi_ (I:)
1f: SCOP_d1sxgp_ (P:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Periplasmic binding protein-like I
(179)
Superfamily
:
Periplasmic binding protein-like I
(179)
Family
:
L-arabinose binding protein-like
(114)
Protein domain
:
Glucose-resistance amylase regulator CcpA, C-terminal domain
(11)
Bacillus megaterium [TaxId: 1404]
(10)
1a
d1sxga_
A:
1b
d1sxgb_
B:
1c
d1sxgd_
D:
1d
d1sxgf_
F:
1e
d1sxgi_
I:
1f
d1sxgp_
P:
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CATH Domains
(1, 12)
Info
all CATH domains
1a: CATH_1sxgA02 (A:161-291,A:324-332)
1b: CATH_1sxgB02 (B:161-291,B:324-332)
1c: CATH_1sxgD02 (D:161-291,D:324-332)
1d: CATH_1sxgA01 (A:58-160,A:292-323)
1e: CATH_1sxgI01 (I:58-160,I:292-323)
1f: CATH_1sxgB01 (B:60-160,B:292-323)
1g: CATH_1sxgD01 (D:60-160,D:292-323)
1h: CATH_1sxgF01 (F:60-160,F:292-323)
1i: CATH_1sxgP01 (P:60-160,P:292-323)
1j: CATH_1sxgF02 (F:161-291,F:324-332)
1k: CATH_1sxgI02 (I:161-291,I:324-332)
1l: CATH_1sxgP02 (P:161-291,P:324-332)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
[code=3.40.50.2300, no name defined]
(308)
Bacillus megaterium. Organism_taxid: 1404.
(3)
1a
1sxgA02
A:161-291,A:324-332
1b
1sxgB02
B:161-291,B:324-332
1c
1sxgD02
D:161-291,D:324-332
1d
1sxgA01
A:58-160,A:292-323
1e
1sxgI01
I:58-160,I:292-323
1f
1sxgB01
B:60-160,B:292-323
1g
1sxgD01
D:60-160,D:292-323
1h
1sxgF01
F:60-160,F:292-323
1i
1sxgP01
P:60-160,P:292-323
1j
1sxgF02
F:161-291,F:324-332
1k
1sxgI02
I:161-291,I:324-332
1l
1sxgP02
P:161-291,P:324-332
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_Peripla_BP_3_1sxgP01 (P:169-331)
1b: PFAM_Peripla_BP_3_1sxgP02 (P:169-331)
1c: PFAM_Peripla_BP_3_1sxgP03 (P:169-331)
1d: PFAM_Peripla_BP_3_1sxgP04 (P:169-331)
1e: PFAM_Peripla_BP_3_1sxgP05 (P:169-331)
1f: PFAM_Peripla_BP_3_1sxgP06 (P:169-331)
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Clan
:
Periplas_BP
(97)
Family
:
Peripla_BP_3
(41)
Bacillus megaterium
(7)
1a
Peripla_BP_3-1sxgP01
P:169-331
1b
Peripla_BP_3-1sxgP02
P:169-331
1c
Peripla_BP_3-1sxgP03
P:169-331
1d
Peripla_BP_3-1sxgP04
P:169-331
1e
Peripla_BP_3-1sxgP05
P:169-331
1f
Peripla_BP_3-1sxgP06
P:169-331
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Asymmetric Unit 1
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Asym.Unit (265 KB)
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Biol.Unit 1 (90 KB)
Header - Biol.Unit 1
Biol.Unit 2 (90 KB)
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Biol.Unit 3 (89 KB)
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