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1SHQ
Asym. Unit
Info
Asym.Unit (161 KB)
Biol.Unit 1 (154 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SHRIMP ALKALINE PHOSPHATASE WITH MAGNESIUM IN M3
Authors
:
M. M. E. De Backer, S. Mcsweeney, P. F. Lindley, E. Hough
Date
:
26 Feb 04 (Deposition) - 31 Aug 04 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Alkaline Phosphatase, Hydrolase, Phosphomonoester, Cold-Active, Shrimp, Metal Triad, Magnesium, Metal Exchange, Beta Sheet
(Keyword Search:
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Reference
:
M. M. De Backer, S. Mcsweeney, P. F. Lindley, E. Hough
Ligand-Binding And Metal-Exchange Crystallographic Studies On Shrimp Alkaline Phosphatase.
Acta Crystallogr. , Sect. D V. 60 1555 2004
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Hetero Components
(4, 12)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
MG
2
Ligand/Ion
MAGNESIUM ION
2
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
SO4
4
Ligand/Ion
SULFATE ION
4
ZN
4
Ligand/Ion
ZINC ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:114
BINDING SITE FOR RESIDUE NAG A 483
02
AC2
SOFTWARE
ASN B:114 , SER B:116
BINDING SITE FOR RESIDUE NAG B 483
03
AC3
SOFTWARE
ASP A:315 , HIS A:319 , HIS A:432 , SO4 A:486
BINDING SITE FOR RESIDUE ZN A 484
04
AC4
SOFTWARE
ASP A:37 , SER A:86 , ASP A:356 , HIS A:357 , SO4 A:486
BINDING SITE FOR RESIDUE ZN A 485
05
AC5
SOFTWARE
ASP A:37 , THR A:151 , GLU A:310 , HOH A:536 , HOH A:537 , HOH A:538
BINDING SITE FOR RESIDUE MG A 479
06
AC6
SOFTWARE
ASP B:315 , HIS B:319 , HIS B:432 , SO4 B:487
BINDING SITE FOR RESIDUE ZN B 480
07
AC7
SOFTWARE
ASP B:37 , SER B:86 , ASP B:356 , HIS B:357 , SO4 B:487
BINDING SITE FOR RESIDUE ZN B 481
08
AC8
SOFTWARE
ASP B:37 , THR B:151 , GLU B:310 , HOH B:537 , HOH B:538 , HOH B:539
BINDING SITE FOR RESIDUE MG B 482
09
AC9
SOFTWARE
ASP A:85 , SER A:86 , ASP A:315 , HIS A:319 , HIS A:432 , ZN A:484 , ZN A:485
BINDING SITE FOR RESIDUE SO4 A 486
10
BC1
SOFTWARE
ARG A:146 , ARG A:205
BINDING SITE FOR RESIDUE SO4 A 487
11
BC2
SOFTWARE
SER B:86 , ASP B:315 , HIS B:319 , HIS B:432 , ZN B:480 , ZN B:481
BINDING SITE FOR RESIDUE SO4 B 487
12
BC3
SOFTWARE
ARG B:146 , ARG B:205
BINDING SITE FOR RESIDUE SO4 B 488
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d1shqa_ (A:)
1b: SCOP_d1shqb_ (B:)
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Protein Domains
(
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Alkaline phosphatase-like
(78)
Superfamily
:
Alkaline phosphatase-like
(78)
Family
:
Alkaline phosphatase
(56)
Protein domain
:
Alkaline phosphatase
(47)
Northern shrimp (Pandalus borealis) [TaxId: 6703]
(3)
1a
d1shqa_
A:
1b
d1shqb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_1shqA00 (A:1-476)
1b: CATH_1shqB00 (B:1-476)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Alkaline Phosphatase, subunit A
(66)
Homologous Superfamily
:
Alkaline Phosphatase, subunit A
(66)
Northern shrimp (Pandalus borealis)
(3)
1a
1shqA00
A:1-476
1b
1shqB00
B:1-476
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Alk_phosphatase_1shqB01 (B:28-468)
1b: PFAM_Alk_phosphatase_1shqB02 (B:28-468)
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Clans
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Clan
:
Alk_phosphatase
(47)
Family
:
Alk_phosphatase
(22)
Pandalus borealis (Northern red shrimp)
(3)
1a
Alk_phosphatase-1shqB01
B:28-468
1b
Alk_phosphatase-1shqB02
B:28-468
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Asymmetric Unit 1
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