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1SG4
Asym. Unit
Info
Asym.Unit (260 KB)
Biol.Unit 1 (255 KB)
Biol.Unit 2 (507 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN MITOCHONDRIAL DELTA3-DELTA2-ENOYL-COA ISOMERASE
Authors
:
S. T. Partanen, D. K. Novikov, A. N. Popov, A. M. Mursula, J. K. Hiltunen, R. K. Wierenga
Date
:
23 Feb 04 (Deposition) - 18 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: A,B,C (2x)
Keywords
:
Crotonase Fold, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. T. Partanen, D. K. Novikov, A. N. Popov, A. M. Mursula, J. K. Hiltunen, R. K. Wierenga
The 1. 3 A Crystal Structure Of Human Mitochondrial Delta3-Delta2-Enoyl-Coa Isomerase Shows A Novel Mode Of Binding For The Fatty Acyl Group.
J. Mol. Biol. V. 342 1197 2004
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: OCTANOYL-COENZYME A (CO8a)
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Label:
No.
Name
Count
Type
Full Name
1
CO8
1
Ligand/Ion
OCTANOYL-COENZYME A
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO B:24 , VAL B:25 , VAL B:61 , ALA B:64 , LEU B:66 , ASP B:67 , LEU B:68 , PRO B:109 , ALA B:110 , GLY B:111 , ASN B:135 , ILE B:142 , TYR B:251 , LEU B:255 , LYS B:256 , LYS B:259
BINDING SITE FOR RESIDUE CO8 B 701
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: ENOYL_COA_HYDRATASE (A:101-121,B:101-121,C:101-121)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ENOYL_COA_HYDRATASE
PS00166
Enoyl-CoA hydratase/isomerase signature.
ECI1_HUMAN
143-163
3
A:101-121
B:101-121
C:101-121
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Exons
(6, 18)
Info
All Exons
Exon 1.2 (A:2-14 | B:3-14 | C:3-14)
Exon 1.3 (A:14-56 | B:14-56 | C:14-56)
Exon 1.4 (A:57-105 | B:57-105 | C:57-105)
Exon 1.5 (A:106-146 | B:106-146 | C:106-146)
Exon 1.6 (A:146-206 | B:146-206 | C:146-206)
Exon 1.7 (A:206-250 | B:206-260 | C:206-252)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/1.6
6: Boundary 1.6/1.7
7: Boundary 1.7/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000301729
1
ENSE00001197484
chr16:
2301615-2301516
100
ECI1_HUMAN
1-18
18
0
-
-
1.2
ENST00000301729
2
ENSE00001118809
chr16:
2301430-2301317
114
ECI1_HUMAN
18-56
39
3
A:2-14
B:3-14
C:3-14
13
12
12
1.3
ENST00000301729
3
ENSE00001118808
chr16:
2296987-2296860
128
ECI1_HUMAN
56-98
43
3
A:14-56
B:14-56
C:14-56
43
43
43
1.4
ENST00000301729
4
ENSE00001118811
chr16:
2294553-2294407
147
ECI1_HUMAN
99-147
49
3
A:57-105
B:57-105
C:57-105
49
49
49
1.5
ENST00000301729
5
ENSE00001118813
chr16:
2293440-2293319
122
ECI1_HUMAN
148-188
41
3
A:106-146
B:106-146
C:106-146
41
41
41
1.6
ENST00000301729
6
ENSE00001118810
chr16:
2293225-2293047
179
ECI1_HUMAN
188-248
61
3
A:146-206
B:146-206
C:146-206
61
61
61
1.7
ENST00000301729
7
ENSE00001118812
chr16:
2290146-2289396
751
ECI1_HUMAN
248-302
55
3
A:206-250
B:206-260
C:206-252
45
55
47
[
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SCOP Domains
(2, 3)
Info
All SCOP Domains
1a: SCOP_d1sg4b_ (B:)
1b: SCOP_d1sg4c_ (C:)
2a: SCOP_d1sg4a1 (A:2-250)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ClpP/crotonase
(207)
Superfamily
:
ClpP/crotonase
(207)
Family
:
Crotonase-like
(39)
Protein domain
:
Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
(8)
Human (Homo sapiens) [TaxId: 9606]
(1)
1a
d1sg4b_
B:
1b
d1sg4c_
C:
Human (Homo sapiens), mitochondrial [TaxId: 9606]
(1)
2a
d1sg4a1
A:2-250
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CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_1sg4A01 (A:2-204)
1b: CATH_1sg4B01 (B:3-204)
1c: CATH_1sg4C01 (C:3-204)
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Complex
(3881)
Topology
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Homologous Superfamily
:
2-enoyl-CoA Hydratase; Chain A, domain 1
(89)
Human (Homo sapiens)
(6)
1a
1sg4A01
A:2-204
1b
1sg4B01
B:3-204
1c
1sg4C01
C:3-204
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (260 KB)
Header - Asym.Unit
Biol.Unit 1 (255 KB)
Header - Biol.Unit 1
Biol.Unit 2 (507 KB)
Header - Biol.Unit 2
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