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1S1N
Asym. Unit
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Asym.Unit (274 KB)
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Models
(17 )
Title
:
SH3 DOMAIN OF HUMAN NEPHROCYSTIN
Authors
:
A. Le Maire, T. Weber, S. Saunier, C. Antignac, A. Ducruix, F. Dardel
Date
:
07 Jan 04 (Deposition) - 18 Jan 05 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (17 x)
Keywords
:
Beta Barrel, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Le Maire, T. Weber, S. Saunier, I. Broutin, C. Antignac, A. Ducruix, F. Dardel
Solution Nmr Structure Of The Sh3 Domain Of Human Nephrocystin And Analysis Of A Mutation-Causing Juvenile Nephronophthisis.
Proteins V. 59 347 2005
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(3, 3)
Info
All Exons
Exon 1.7 (A:153-174)
Exon 1.8 (A:175-208)
Exon 1.9 (A:209-212)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.6a/1.7
2: Boundary 1.7/1.8
3: Boundary 1.8/1.9
4: Boundary 1.9/1.10b
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000393272
1a
ENSE00001829659
chr2:
110962643-110962477
167
NPHP1_HUMAN
1-23
23
0
-
-
1.3
ENST00000393272
3
ENSE00001636509
chr2:
110959071-110958998
74
NPHP1_HUMAN
24-48
25
0
-
-
1.4
ENST00000393272
4
ENSE00001772412
chr2:
110937261-110937201
61
NPHP1_HUMAN
48-68
21
0
-
-
1.6a
ENST00000393272
6a
ENSE00000963506
chr2:
110936124-110936000
125
NPHP1_HUMAN
69-110
42
0
-
-
1.7
ENST00000393272
7
ENSE00001255671
chr2:
110927575-110927383
193
NPHP1_HUMAN
110-174
65
1
A:153-174
22
1.8
ENST00000393272
8
ENSE00000963508
chr2:
110926130-110926029
102
NPHP1_HUMAN
175-208
34
1
A:175-208
34
1.9
ENST00000393272
9
ENSE00001255651
chr2:
110922732-110922629
104
NPHP1_HUMAN
209-243
35
1
A:209-212
4
1.10b
ENST00000393272
10b
ENSE00001255706
chr2:
110922307-110922097
211
NPHP1_HUMAN
243-313
71
0
-
-
1.10e
ENST00000393272
10e
ENSE00001009341
chr2:
110920709-110920625
85
NPHP1_HUMAN
314-342
29
0
-
-
1.11
ENST00000393272
11
ENSE00000963512
chr2:
110919274-110919180
95
NPHP1_HUMAN
342-373
32
0
-
-
1.12
ENST00000393272
12
ENSE00000963513
chr2:
110917832-110917704
129
NPHP1_HUMAN
374-416
43
0
-
-
1.13
ENST00000393272
13
ENSE00000963514
chr2:
110907833-110907759
75
NPHP1_HUMAN
417-441
25
0
-
-
1.14
ENST00000393272
14
ENSE00000963515
chr2:
110905603-110905493
111
NPHP1_HUMAN
442-478
37
0
-
-
1.15
ENST00000393272
15
ENSE00000963516
chr2:
110904412-110904330
83
NPHP1_HUMAN
479-506
28
0
-
-
1.16a
ENST00000393272
16a
ENSE00000963517
chr2:
110902146-110902070
77
NPHP1_HUMAN
506-532
27
0
-
-
1.16d
ENST00000393272
16d
ENSE00000963518
chr2:
110901218-110901119
100
NPHP1_HUMAN
532-565
34
0
-
-
1.17
ENST00000393272
17
ENSE00001255563
chr2:
110889368-110889256
113
NPHP1_HUMAN
565-603
39
0
-
-
1.18a
ENST00000393272
18a
ENSE00001255552
chr2:
110886836-110886763
74
NPHP1_HUMAN
603-627
25
0
-
-
1.18d
ENST00000393272
18d
ENSE00001255543
chr2:
110883258-110883214
45
NPHP1_HUMAN
628-642
15
0
-
-
1.18i
ENST00000393272
18i
ENSE00001932854
chr2:
110881640-110880913
728
NPHP1_HUMAN
643-732
90
0
-
-
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d1s1na_ (A:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
SH3-domain
(369)
Family
:
automated matches
(114)
Protein domain
:
automated matches
(114)
Human (Homo sapiens) [TaxId: 9606]
(74)
1a
d1s1na_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_1s1nA00 (A:153-212)
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Organisms
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)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Roll
(1513)
Topology
:
SH3 type barrels.
(648)
Homologous Superfamily
:
SH3 Domains
(267)
Human (Homo sapiens)
(133)
1a
1s1nA00
A:153-212
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_SH3_1_1s1nA01 (A:158-204)
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Clans
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)
Clan
:
SH3
(175)
Family
:
SH3_1
(141)
Homo sapiens (Human)
(69)
1a
SH3_1-1s1nA01
A:158-204
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Chain A
Asymmetric Unit 1
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Asym.Unit (274 KB)
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